PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01083.1.g00150.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 549aa    MW: 60063.9 Da    PI: 10.5847
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01083.1.g00150.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57380.32.9e-25229332297
                        DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkep.. 78 
                                   ++ r+ws eDe+++L++li f+ k+g    + +d+ ++ +++ +++ +k+s++ql++KirrLK+K+k    +ak+g+ep  
  Zpz_sc01083.1.g00150.1.am.mk 229 RPPRVWSPEDEVTILRALIAFQGKKGRlpASIQDTAKLESQIGGQLIAKASTTQLSDKIRRLKHKYKLLAIRAKKGREPdl 309
                                   578************************777888*********************************998888777766500 PP

                        DUF573  79 ....sfskehdqkifelskkiWg 97 
                                       ++  +h+++++elskk+Wg
  Zpz_sc01083.1.g00150.1.am.mk 310 erepDLPMDHEREVYELSKKVWG 332
                                   000055678*************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.6E-23231332IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    Send to blast
MAPKRPATGA AAAASGSASN ASDAEGDAGH QRRRRHSPSP ARTRSRSRSK TPPTNLRPNA  60
AALSATPIST GADYAAASDS DADGRDQSPR RRRERYPTPR SYSDADAAGR VPSPRRDRQR  120
SPRLYSDSDS DADAAAGGRI SSLRRSRDRS PRLHSEPDNS GATEGGGEGN VSPLPRARRS  180
TRIETSNIKP VSSRLMDEQR RSAGAASSQR RSKRRLRSPA LPSAEHNKRP PRVWSPEDEV  240
TILRALIAFQ GKKGRLPASI QDTAKLESQI GGQLIAKAST TQLSDKIRRL KHKYKLLAIR  300
AKKGREPDLE REPDLPMDHE REVYELSKKV WGAIGTDGFT EVGGSLTYEN AGDEESNEEQ  360
EIEESDEGMD SGWDVRDRPK KLKAFSENGS MNAIAGNGNV FATGCRSKAS QGGGGGKDYP  420
GKGQQMYPYL WEAVEELSKN HPSGQIFRKA FGVLEKAKAH VMEEKLRKFR MSEIRQQLRR  480
MDLMKETVTM VLDALEGTAA QAGLFHEPQG CLRAASRSRL AFQAFFPVTK PPLPSSPAPA  540
PWHRDTAAC
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01083.1.g00150.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025821022.11e-165serine/arginine repetitive matrix protein 1-like
TrEMBLA0A0A9BR300.0A0A0A9BR30_ARUDO; Uncharacterized protein
STRINGSi013598m1e-162(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-11DNA-binding storekeeper protein-related transcriptional regulator