PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00876.1.g00180.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 207aa    MW: 22209.3 Da    PI: 9.5527
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00876.1.g00180.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.4e-082590454
                                  HHHHHHHHHHHHHHHHHHHHHCTSCC.C................TTS-.STCHHHHHHHHHHHHHH CS
                           HLH  4 ahnerErrRRdriNsafeeLrellPk.as.............kapskK.lsKaeiLekAveYIksL 54
                                    + +E++RR +++    +L +l+P+ a              ++p+k  ++  + L  A  YIk+L
  Zpz_sc00876.1.g00180.1.am.mk 25 ERKDVEKNRRLHMKGLCLKLSSLVPPsAAakhaalrsapassSNPNKDtVTQLDHLDNAAAYIKHL 90
                                  56789*********************555*************7777777****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.3692190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.4E-1123103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-923104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-52590IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MKSRRQSGSA AAGEGTAHSG HNKMERKDVE KNRRLHMKGL CLKLSSLVPP SAAAKHAALR  60
SAPASSSNPN KDTVTQLDHL DNAAAYIKHL TERIEELRQR KGSSSRHALS APTAAAGDVR  120
MPVIEVRCQD GALEAVLVSA AERPFRMHEV VAVLEQEGAE VVSASFSVVG DKVFYTVHSQ  180
ALISAGVEGL DVARVADRLR GLLLVEY
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00876.1.g00180.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004967963.14e-82transcription factor bHLH168
TrEMBLK3XLS41e-80K3XLS4_SETIT; Uncharacterized protein
STRINGSi002847m2e-81(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.12e-16bHLH family protein