PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00840.1.g00090.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 314aa    MW: 34929.2 Da    PI: 5.5705
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00840.1.g00090.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-09137192454
                                   HHHHHHHHHHHHHHHHHHHHHCTSCC.C.......TTS-STCHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPk.as....kapskKlsKaeiLekAveYIksL 54 
                                    h ++Er+RR+++ + f++L +++P        ++ +   +K++ L  ++eY+++L
  Zpz_sc00840.1.g00090.1.am.mk 137 EHVIAERKRREKMHHQFATLASIVPDiTKwmmlSEFNLQTDKVSLLDSTIEYVHKL 192
                                   6999**********************666************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.59E-13129205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.83133192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-12137206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.6E-7137192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.72E-9138197No hitNo description
SMARTSM003533.9E-10139198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MESANHQWLQ ELESDDEGEL ELINPLSMQK LAESLANELW GQPQEQQDNQ QEQCGYRSPS  60
LTGSHFVGHA NSTNRTKISS GVSNNMFPFT EASSSPVNLA AKEYTQQGVY STTTVKCCSS  120
SMTAKGGARR STSSVQEHVI AERKRREKMH HQFATLASIV PDITKWMMLS EFNLQTDKVS  180
LLDSTIEYVH KLRDRLKALQ DELQTTGSNT EESPAFDADC CVAGSKPNDG GDEAVSPKIE  240
VDVRGTTLLL RLVCREKKGV LLTVLMELEK HRISIVNTNV VPFAESSLNI TITAQVLHYL  300
LSNIPNGQWE LHHN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141146ERKRRE
2142147RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00840.1.g00090.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022685471.11e-101transcription factor bHLH19-like
TrEMBLA0A368SM721e-100A0A368SM72_SETIT; Uncharacterized protein
TrEMBLK4ACR61e-100K4ACR6_SETIT; Uncharacterized protein
STRINGSi036673m1e-100(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP138961725
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.11e-22bHLH family protein