PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00809.1.g00030.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 166aa    MW: 18006.5 Da    PI: 6.1018
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00809.1.g00030.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.20.000342173954
                                  TCHHHHHHHHHHHHHH CS
                           HLH 39 sKaeiLekAveYIksL 54
                                  +Ka+i + A+eYI +L
  Zpz_sc00809.1.g00030.1.sm.mk  2 DKASIIKDAIEYILQL 17
                                  8**************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.82E-5137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-4132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MDKASIIKDA IEYILQLHQL ERQLLAEISL LEAASTHSLL VDTPSSAISA AGAAAAMADS  60
CCDGHVVSPT KKMKAAPCPD TETQRNVYGS FKYTGLLQAT NDILSEEYLK FKKCSKMELG  120
DCYQAVTARV QNNIKNSMGA DSHGVDFVVY GTPPIKREED TSACKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00809.1.g00030.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4201422