PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00801.1.g00070.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 1195aa    MW: 128322 Da    PI: 10.9761
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00801.1.g00070.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.51.2e-13841887354
                                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                   r+h+e+ErrRR+riN  +++Lr+llP+a     +K +Ka+ L ++ +++k+L
  Zpz_sc00801.1.g00070.1.am.mk 841 RSHSEAERRRRQRINGHLAKLRSLLPNA-----TKTDKASLLAEVLDHVKEL 887
                                   78**************************.....9****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF107166.4E-25143215IPR019654NAD(P)H-quinone oxidoreductase subunit L
PROSITE profilePS5088816.672838887IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.1E-11841887IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.44E-13841890No hitNo description
Gene3DG3DSA:4.10.280.101.3E-13842896IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.11E-14842896IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-12844893IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2601.7E-4933980No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0016655Molecular Functionoxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 1195 aa     Download sequence    Send to blast
MVGGASIDNC CNGSVTGGFD PCKKNLTIRC APRPRLTRKA HRKTRLERPA MDATASWRVL  60
SPASSAPPRA LQLLPKRQAI LAGAPRYSAS SKSRVLCLLH DKPALTAEKE SSQLQLQRLA  120
AALQWGAVWA AVEAPAALAV TGEEDLDILG ILPTVAAFAF FYFLVAPPLL MNWMRTRWYK  180
RKFVETYLQF MFTYIFYPAL MFWAPFVNFR KFPRDPTMKY PWSKPKEGTP LFKDRYPPIE  240
SYNTHRLALS LRHMSPAGAH SSRENLEHLH ACSLFSGREK GEHAFLGIPA PAGSSKRKGA  300
WHSRHNGVAG VSSTRGARCG GVPSASCAIA AGLGCAAAAV MASSSPIHTP RWEGKNCAST  360
QNLPSTTLEL ISMLDPAMLA GLPPSSPLTV RAIVVSDHLI YLGTDGVTSP DFLRILRIAP  420
PSHSLSSIAS LSSPKASSSS LTRSFPALFV ASAPYTASPL SLLTSMETPP PRLAPSPLPA  480
AKICSALDSR CAAAPAARRR HRGMAASRPY WTLYAAAKRG GACYTAPELG QKEERKEAAS  540
AKRASKLCCE PHDTGSGRAR RPSGGPRPTA RTGRGMLRSP CMTQSSGRAS GPGARGGNNC  600
VRSGAAEEAH APDKRPRSLY GTTGEEGRRQ RRAVLCGSGG TPEPGCLFPL TARQGRVARL  660
CRAGSGTTAA PMDHGFMVPE WVAATSIVVL KRRRPFDRER EQPEATTGST PPPTTSLSSR  720
AQGRQPGMWD GGVEHGSQEA AHHPLLGKPW LGAAPFSEPD VRVFEAAGAG YACDVFGGLG  780
HGGDGVLGFG FDAMPQQRRP RQHDPQRGKA GVSGLLGSLQ AELGRMAARD MMDAKALAAS  840
RSHSEAERRR RQRINGHLAK LRSLLPNATK TDKASLLAEV LDHVKELKRQ TSAMMVASDE  900
EASGTAQPLP TEADELAVDA AVGSDGRLLA RASLCCKDRP DLIPDIVRAL AALGMRARRA  960
EITTLGVRVR SVLLITADEG TGGDGDGQDD DRPIALHDDD ERTASHRRHE CITSVQEALR  1020
GVMDRRAASS DTSSPGGGGS IKRQRMNYAA QRQCSLESLS IGAGFGGPRL PRMFRDHEGL  1080
GRRRHRSSVG SIRRWASWTR PSAPSAPHGW LRPRPRSRSR RPISIPTRPS IARGAGRSHT  1140
RTNSGRWAGR AVSAPPKAPI RTICPESPRR ARGRRQDQGH IGTYACGGSN TELTI
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00801.1.g00070.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0639091e-125BT063909.1 Zea mays full-length cDNA clone ZM_BFc0119D05 mRNA, complete cds.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-32bHLH family protein