PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00717.1.g00310.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 411aa    MW: 42561 Da    PI: 5.7157
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00717.1.g00310.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57331.16.4e-10771175897
                        DUF573  58 irrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 
                                   +rrLK+K++++v++ ++sg+ +sf+++h+q ife+++ iW+
  Zpz_sc00717.1.g00310.1.am.mk  77 LRRLKRKYRNCVSRlRDSGDAFSFRSPHEQAIFEIARNIWR 117
                                   79************8999**********************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.4E-877116IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MSPTGDDPSA TAAAAAPGGT SFPDADGGGD SEDGDFPHAH LLDPSEPGLP DPASSSAAVL  60
PHAVPAGGSG SGSGGPLRRL KRKYRNCVSR LRDSGDAFSF RSPHEQAIFE IARNIWRPAN  120
KHGRDPAADS DDEDAVASAA ATAVPGSTSP NGKVMSPSSG RQRRRRRATE AGPAPAPAMN  180
MVQPPQPVQL PVSVPVKMDD SPALTQTPMP VMVTMDGSEP LRLPAMSPQS GVPDAEKNCL  240
IPLLKDMISA VINVGVNPFG AKLPELPLGL PMEGEKWRKQ RILELEVYLK RIELLQDQLP  300
GIARDVGPGA LDRPYGIVMD PCVAMGISFA AGGETGCELE ASSTKAQGDG VNGVSPSKRF  360
SSRSSGPRRE PLPPDPAAIA ADTPPPAPPP PLSPGATATV LPPPPPFRHS S
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00717.1.g00310.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002461092.11e-106probable transcription factor At3g04930
RefseqXP_025799483.11e-106probable transcription factor At3g04930
TrEMBLA0A1E5UXC01e-112A0A1E5UXC0_9POAL; Uncharacterized protein
STRINGPavir.Bb03462.1.p1e-107(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.26e-10DNA-binding storekeeper protein-related transcriptional regulator