PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00713.1.g00260.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 328aa    MW: 36586.1 Da    PI: 4.4714
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00713.1.g00260.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573477e-15152241398
                        DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfsk 82 
                                   fqr ws++De+ +L  l   + ++g+ p++ d++a      +  ++++  +ql+ K+++L+  + + vkk   g+    sk
  Zpz_sc00713.1.g00260.1.am.mk 152 FQRSWSKDDEVRILETLAAHRREHGTLPHHkDLEAALA--GSLDNSDYRGNQLLGKVKSLRSVYSRTVKK---GEL--PSK 225
                                   9************************9776657777543..3344689***********************...544..579 PP

                        DUF573  83 ehdqkifelskkiWgs 98 
                                   +hd+ if+lsk +Wgs
  Zpz_sc00713.1.g00260.1.am.mk 226 DHDRRIFNLSKEVWGS 241
                                   9*************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.7E-19152240IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010629Biological Processnegative regulation of gene expression
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005730Cellular Componentnucleolus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MAPKRPAPPP PPVESSEETD SGSGSEESEE EIALSPPTAT APKNTVRPPP QPEASDESSS  60
EEEDESGEED EEEEEEALKS NYTVPPTANP NPPPPLPTQE ESESDEEGEE SESEEEANDD  120
APQKESASKL AAEANGEKLP PSSGDNKRGG FFQRSWSKDD EVRILETLAA HRREHGTLPH  180
HKDLEAALAG SLDNSDYRGN QLLGKVKSLR SVYSRTVKKG ELPSKDHDRR IFNLSKEVWG  240
SDNSPADHTV KRNFEEMCKL YPFFSEEAKA LEKTHPGLLK REFGVIDDEK ARVLEQKIKK  300
QRLMQMKVEL RRHDLTKELT KALMDLVQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00713.1.g00260.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004954058.27e-76uncharacterized protein LOC101755591
TrEMBLA0A3L6QKU31e-84A0A3L6QKU3_PANMI; Uncharacterized protein
STRINGPavir.Aa00346.1.p8e-83(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67292737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00238.18e-11DNA-binding storekeeper protein-related transcriptional regulator