PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00627.1.g00150.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 513aa    MW: 57791.1 Da    PI: 11.2066
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00627.1.g00150.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.15.6e-174893555
                                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                  hn  ErrRRdriN+++  L+ellP++     +K +K+++L +A++Y+ksLq
  Zpz_sc00627.1.g00150.1.am.mk 48 HNFSERRRRDRINEKLKALQELLPNC-----TKTDKVSMLDEAIDYLKSLQ 93
                                  9*************************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.109.8E-1941100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.96E-164197No hitNo description
PROSITE profilePS5088818.4824392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-2046120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-144893IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-184998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    Send to blast
MDLEGEGTLV EVRRRDEEQG EVHQELMEEV RAPRTTPPTR RSRSVEFHNF SERRRRDRIN  60
EKLKALQELL PNCTKTDKVS MLDEAIDYLK SLQLQLQMLV MGKGMAPVVP PELQQYMHYM  120
TADPAQMPPP PLRPSQQPRP FQITQADPQR QSNVESDFLS QMQNLNPSEP PQNFLRPPKL  180
QLYTPPWADS PCRHQRASEC ALRRAVVGLF GPRSVSPSSF VSCLLVPDRA FPCSCSHLSS  240
LSRPTRRLRP PLKLLSAKAQ LLEVDAVEQS LCPAAPHRRV GPGGAPLTSG PRLHPHPHXX  300
XXRTSRWRRF VAVVRGGGSS RWPARGGGGS SRWSASRVPR KVTGAGNDVS PDDGWIRRDA  360
LLERQQRLEL HGHGRVVRYR FRLRRQEQCH RRPVVESSVD SKLWREGYGA AAEARDADGP  420
PNVQVHRYVR WAGCLAPASS PRAARTYLSA SCHLCRARAP FRRPPLLARA GRFRRRKQAT  480
SRCSDTARPV PCLAIVGAAK PGHEYPSVSV SLW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15156ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00627.1.g00150.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP95623043
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.13e-28phytochrome interacting factor 3-like 5