PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00621.1.g00100.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 954aa    MW: 102278 Da    PI: 10.282
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00621.1.g00100.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.2e-09534582355
                                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  Zpz_sc00621.1.g00100.1.am.mk 534 NSHSLAERLRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 582
                                   58*************************9....556*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.93E-15529591IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.68E-10529586No hitNo description
PROSITE profilePS5088815.65531581IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-14532587IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-6534582IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-11537587IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 954 aa     Download sequence    Send to blast
MWIGRRGAGG AEDKCMTRRP TRMVEKFMAQ AHSIEQLLGT LGPTEACGAT FVELHKAFSK  60
NSTRHHVDSD SNKVTWAEAS DRHLAHFQIP PHPLPELAHA APPRAQRPSP LAVAGGAVVH  120
PSVLVAASRM PPPTVPFFLT STTLAATNKP QLPAPPPTPP CDAQAQAATT ASLASASYAV  180
RMRLNPHLAL HLFDHMLRTG ECNAPRPASV AVHKARQRES GNKTWMAKEA LSGMPVNHCL  240
RVNSFFTFPC FFNFTFALWL LGFPALLHRA TSALLREVQP RSTDMNNESN EKGMESNRAS  300
SGVAGIPVEW QNQFSAAFPC PPAQQQAPMM DSFASAGLWA STSQAMGLSD AMSAARGTGF  360
LAPVPGFLPQ GLGHFPVDSG FIERAARASC FGGGGSGGEM MGSNAGFGAA DQPMSNAFSG  420
SSEALLDRQR KDGNDKAEPE LDGHEEVPSS EAAGGDCSSK GTLDSKKRRR PNEVQSSNLP  480
ANSANESVHS KDKGEESSPA TTAGKSKGKG SKETSDAQKE EYIHVRARRG QATNSHSLAE  540
RLRREKISER MKLLQDLVPG CSKVTGKAVM LDEIINYVQS LQRQVEMAYP SLGSQDLSMR  600
PSQDGFQMRS RTGRRSTQIK PASHPCAAVR DTLARLRRPV RLHAAGRLSQ SRWVGVSSGD  660
SDAGSDNPAR ASGPACHIPS TCLAPRARCR RSRSPMNVHR RTPVEVVRAP RDESRFVPRT  720
RCHLPRHALY STTAFLSPEE LNMNSPAGRP FLSISSVFAD RPLPTRTLRV AATDIPGPSP  780
EPHGMHGRME NWKDKQHSQH RAATCNWNVA RSYRCLPLSE TSFSSAPRGM TQMRRPCGAQ  840
GQRPETTRGH VRSSDSGLPA QQQLTSGTGT PMAGTGMAKG RRGPATIAAT WPDPAQLGGG  900
TACPEGGASW PESTQPGGGE AVSASRSSFD ITRPFIKPGE DDAVGARSLT ASRG
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00621.1.g00100.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1214181e-100AK121418.1 Oryza sativa Japonica Group cDNA clone:J023133H05, full insert sequence.
GenBankHQ8588631e-100HQ858863.1 Oryza sativa Japonica Group isolate UT1672 bHLH- transcription factor mRNA, partial cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29093785
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.33e-42bHLH family protein