PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00382.1.g00190.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 651aa    MW: 72352.1 Da    PI: 10.4046
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00382.1.g00190.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.4e-08524568554
                                   HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                   h +rEr+RR+++ ++++ L +++  +      K +K +i++ A  YI++L
  Zpz_sc00382.1.g00190.1.am.mk 524 HMMRERQRREKLSQSYADLHTMVAAR-----SKGDKNSIVQSAAIYIHEL 568
                                   889**********************7.....6999999*********998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.98E-12519589IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.833519568IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.65E-7523573No hitNo description
Gene3DG3DSA:4.10.280.101.3E-9523586IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-6524568IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-5525574IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    Send to blast
MKLDAPRRRV SLDHFSEECV RLRPFSLCRR LKLVGLFWAS FCSEERSGHD PHLLSTARAV  60
TTTAAAPRRR GANLSKSKLR QLRDKIAELE SAGKPPKEEG EEEEQGGTST DRTELLEERT  120
TNKEASVNNE PSETGSGDHH RSPEKSGWSH LEREARSGET LPRASELEQL VPGAAMVGYA  180
SYPIQLRGKQ WTRDGPARRA RARLQGDSGL NAAWAWSHSL VFPRRHPFLP IGVPQGEHAE  240
ERGVSWDCPR PRRDYLWTGL ERTAALSPSI DHARASATTK GLIGLASNVR ARTYVEYLAE  300
SRGRSNRMVA GTSSYGCDIG SGSSSSVRSA RYRRTSDTFN MQSLLVICAP NVHGSQGVVR  360
SRRRVADDSF SRRGLIQVHT TRVARRGGSC GRALFSLLAF ERHQGDNQTS PLATPGPPRQ  420
RRLLARSRRE MQMDVGAPYF YAGFHDEIPC FYPHGFAPAA SPELLPFGFD STSPLLEQPG  480
APELQTSGTA PQGSTWTNVQ TREEEEGRRR QPAGAVESSR GFRHMMRERQ RREKLSQSYA  540
DLHTMVAARS KGDKNSIVQS AAIYIHELKG AREQLRRRNE ELKARILGHD ARQPSVKVDF  600
EVDDPASGTD CMIGALRRLR SMGVKARGIR SSMSGGKLWT EMNVETTVSD P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1631RRRVSLDHFSEECVRLRPFSLCRRLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00382.1.g00190.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59403450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-20bHLH family protein