PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00370.1.g00260.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TCP
Protein Properties Length: 348aa    MW: 35361.3 Da    PI: 9.167
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00370.1.g00260.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1289.8e-4056149294
                           TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssss 81 
                                   ++k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss
  Zpz_sc00370.1.g00260.1.am.mk  56 PPKRSSTKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSS 136
                                   689******************************************************************999888888888 PP

                           TCP  82 asnsssgkaaksa 94 
                                   +s+ s++++ ++a
  Zpz_sc00370.1.g00260.1.am.mk 137 GSSFSIPAHLRAA 149
                                   8877777555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036346.7E-3961178IPR005333Transcription factor, TCP
PROSITE profilePS5136927.67562116IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MDITGDTGGG RRPNFPLQLL EKKEEQPSST SPAAAGGPNG SAAAQGGELQ VRKVEPPKRS  60
STKDRHTKVD GRGRRIRMPA ICAARVFQLT RELGHKTDGE TIEWLLQQAE PAVIAATGTG  120
TIPANFTSLN ISLRSSGSSF SIPAHLRAAG LPGSRFGGAR GDAWDRVVGL GFGGGGAEGP  180
ASATSSASSP LLLSFHSGSV AAAGGGTESI WTFPQSGSGG AATVYRGVPS GLHFMNFPAP  240
MALIPGGQQL GLAAPVGGGT DNGGGGEGHM GVLAALNASR AQAVTVAAQN GAEGSRNRNA  300
PTACIQHGSD HAMSAYWYYP RAAPTATNQP QPVPNFPFPQ LDDHGADA
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00370.1.g00260.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006655935.11e-103PREDICTED: transcription factor TCP14-like
TrEMBLA0A0A8Y7R21e-113A0A0A8Y7R2_ARUDO; Uncharacterized protein
STRINGGRMZM2G142751_P011e-104(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.14e-46TCP family protein