PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00322.1.g00060.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 422aa    MW: 45202.2 Da    PI: 5.3205
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00322.1.g00060.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573112.13.6e-3586185297
                        DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkep 78 
                                   lfqrlw+eeDeiv+L+G+ +f+a +g+   +++ d+d fye +++++++++sksqlveK+rrLK+K++++v++ ++sg+ +
  Zpz_sc00322.1.g00060.1.sm.mk  86 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRRRLQLDFSKSQLVEKLRRLKRKYRNCVSRlRDSGDAF 166
                                   79************************99877778***************************************8999**** PP

                        DUF573  79 sfskehdqkifelskkiWg 97 
                                   sf+++h+q ife+++ iW+
  Zpz_sc00322.1.g00060.1.sm.mk 167 SFRSPHEQAIFEIARNIWR 185
                                   ******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.2E-3187184IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MSPTGDDPSA TAAAAAPGGT SFPDADGGGD SEDGDFPHAH LLDPSEPGLP DPASSSAAVL  60
PHAVPAGGSG SCGPVTSGNG SERRPLFQRL WTEEDEIVIL RGFAEFTAAR GTAFASHQYD  120
TDPFYEDMRR RLQLDFSKSQ LVEKLRRLKR KYRNCVSRLR DSGDAFSFRS PHEQAIFEIA  180
RNIWRPANKH GRDPAADSDD EDAVASAAAT AVPGSTSPNG KVMSPSSGRQ RRRRRATDAA  240
PAPAPAMNMV QPPQPVQLPV SVPVKMDDSP ALTQTPMPVM VTMDGSEPLR LPAMSPQSGV  300
PDAEKNCLIP LLKDMISAVI NVGVNPFGAK LPELPLGLPM EGEKWRKQRI LELEVYLKRI  360
ELLQDQKGRI AAASVEDTII CQLLLLPGIA RDVGPGALDR PYGMVMDPCV AMGMYATEGN  420
HG
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00322.1.g00060.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025799483.10.0probable transcription factor At3g04930
TrEMBLA0A1E5UXC00.0A0A1E5UXC0_9POAL; Uncharacterized protein
STRINGPavir.Bb03462.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.24e-35DNA-binding storekeeper protein-related transcriptional regulator