PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00239.1.g00170.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 273aa    MW: 27609.1 Da    PI: 5.9781
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00239.1.g00170.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.46.8e-05217240831
                                   HHHHHHHHHHHHHHHHHCTSCCC. CS
                           HLH   8 rErrRRdriNsafeeLrellPkas 31 
                                    Er RR+++++ +++L + lP ++
  Zpz_sc00239.1.g00170.1.am.mk 217 TERDRRKKMRTLYSTLHSFLPRLP 240
                                   6********************964 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.36E-5212244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MSQQGANFSQ DVEGSLPGGA GSEGTAGSGS SSAKQAVEII SSGWKPASPV INLPQEVQGT  60
HVGDASPGEF TPEAVVLAGT AGFNSSFSSV KLAAEDGGGG SNPASPLEVQ AGDKTAGSKP  120
PSPVVGLVAH AGEPARPAAV VGAGGSDKGK EKDEPAAEEG AGDIAGSSSK SIKSSSDGDV  180
QGDAKDAPAP AAGGDGSGKR KGKGVTAEAD HALHMWTERD RRKKMRTLYS TLHSFLPRLP  240
EKERGDAGRS KQEQHYRNER SKGWDCGRVP ADQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00239.1.g00170.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20053691
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-10bHLH family protein