PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00236.1.g00450.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 262aa    MW: 28469.8 Da    PI: 6.6736
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00236.1.g00450.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.57.7e-06118149337
                                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS- CS
                           HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskK 37 
                                   + h  +ErrR +++ + f  L +l+P +   +++K
  Zpz_sc00236.1.g00450.1.sm.mk 118 QEHVVAERRRHEKMQQQFVALATLVPDL---TKEK 149
                                   57999**********************8...4444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.93E-5118149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-6119149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MYQHEEQPGM LAHPPPEQQR YYTSPQAMAP PNPYHPSPHS QSSAFPNFGA GHALPTPPFR  60
GVAVKNEAGQ PSSSTSNSLS FGGQQTRTLS FSAGDWTDGT EAVQQVLERR NRTHLNTQEH  120
VVAERRRHEK MQQQFVALAT LVPDLTKEKV RTLEEQSATG ASDPTVFESK CRISSDNVDA  180
SWPNASSSAG AMSGYVPTVE ASIHGNTVLV KICCKEGRGV LVMVFSEIEN HGLSILNTSV  240
LPFTDSCLSI TITAKARLLV LD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00236.1.g00450.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021316601.18e-88transcription factor bHLH18
RefseqXP_021316605.18e-88transcription factor bHLH18
TrEMBLA0A3L6SAV42e-92A0A3L6SAV4_PANMI; Uncharacterized protein
STRINGOB03G19470.11e-78(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64013149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.16e-24bHLH family protein