PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00120.1.g00040.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 428aa    MW: 46364.7 Da    PI: 7.0765
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00120.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.21e-06270311955
                                   HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                                    r RR+ri ++ +eL +l+P         +ls ae+L +A +++k Lq
  Zpz_sc00120.1.g00040.1.am.mk 270 ARERRRRISQKTAELSRLIPGgH------RLSTAEMLHEAAHHVKLLQ 311
                                   5889999*************955......9***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.426261310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-9265320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-6267317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-7267316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.80E-7269314No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MDKAHDCGAR SPRPSRRHEL VVAPPPDERE AEAATRRWRL HGMWRRSIQG AKNLHEKQNE  60
SRGLAAHPPS ISRRCRILLP PASPPPPPPP SQNSLSSSAQ QPPMALSFHP TTAPVFGHGL  120
PAPDAADVTS FLHDVHPEVS DALLGFVYDP LDAASTDAVL EDLLSIPNDA DAFTTGPVVD  180
DCDVSGFLGP IEDQFLTEVI EVEQHCDKKL RTACNCNQQA PAALPEFLTE FDLPPPPLKQ  240
PPTPLTFVHG ADDAKKPGGN GGQSVQSTAA RERRRRISQK TAELSRLIPG GHRLSTAEML  300
HEAAHHVKLL QAQVGMLALM RSVGSSENEK LPIAAAQEQM HALLVSGSVQ ERLTAERKCL  360
VPRKLVDAMA RDKAVKSNPL VNRDLTRPPL ACIRARTAAS LFAENAVRRA AGAVVCWFLT  420
PDPDDVCP
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00120.1.g00040.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014661333.11e-89uncharacterized protein LOC101765829
TrEMBLA0A3L6S6L12e-89A0A3L6S6L1_PANMI; Uncharacterized protein
STRINGPavir.Ia04589.1.p6e-94(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62013051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.13e-22bHLH family protein