PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00092.1.g00230.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 1031aa    MW: 110099 Da    PI: 7.9741
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00092.1.g00230.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.3e-134044431155
                                   HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   rRRdriN+++  L+el+P++      K +Ka++L +A+eY+ksLq
  Zpz_sc00092.1.g00230.1.am.mk 404 RRRDRINEKMRALQELIPHC-----NKTDKASMLDEAIEYLKSLQ 443
                                   8******************8.....6******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.107.2E-17386450IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.23E-16386454IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.91E-15391447No hitNo description
PROSITE profilePS5088814.869393442IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.5E-14394448IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.6E-10404443IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:2.60.40.7602.9E-6637674IPR007117Expansin, cellulose-binding-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 1031 aa     Download sequence    Send to blast
MPLYSCLKAT AGPLRPSSSF SSSTAYSSSH TEKEIQTPAG EHQNLENPSA WIAKPSVGAN  60
GIEASCEPIP ERLGAMNQFV PDWSNDMGDN SRPLGEDDDL IELLWCNGHV VMQSQTNRKL  120
PPRPEKPGLG PPVAAAAAAA TAAPVAQEDE AGLWFPFALA DSLDKDIFSD FFCDAPMVAP  180
VAAPATAVEA GKSPCRDVPV PPPEDGMRGA VSEAPPCDLM PPPKSTPHVS CSRQQTISLG  240
DGDHADDLSE LVRAGAAGSG RKAGTEAGAA SSSMLSAIGS SICGSNQVLV PRAVSVPDTA  300
YALPSAVGSA NANASGRCHE TTVASSSGRS NGCFGTTTTE PTSTSNRSSK RKRLDTEDSE  360
SPSEDAEWES AAAARKLPPK MATARRSRAA EVHNLSERVR VFPRRRDRIN EKMRALQELI  420
PHCNKTDKAS MLDEAIEYLK SLQLQVQMMW MGSGIAAPPV MFPGVHQYLP RMGVGMGAAA  480
AMPRMPFMAP QPVVPSPPVN PVPLSPGQMP AVGITEPYAH YLGVNHLQPT PTQHFTQGVG  540
YYPLGTKGVQ QNPAIHAPGG AAAGIKVLFV VGKMTTLERS RGQGVTVIFR LRADDALVLL  600
CADLTDPWPP PGCTAFTNKL VPRLTHTRVF SSSATLGFPL KCPFSIRLTS QSGGHLIQDD  660
VVLADWKANT LFFSFPQCPS SSVSSRIGSD CGFAFSATAA AVAAATARVS AAAATVGFSG  720
NDGAAFEYRH CCCKRAVVDV PLLETRAVIA VPHEPPSPSC SQTVIRRQQY TVQLLLTLFK  780
LQLTLCKLLL ILCKLLLKLR VLIAQRKLVW ITHCTYDYEP HPKRVVLIVD RKQSCWSPLD  840
FLLVILAKLG ESLLETLGVH RPRRPLRTCL VGRDPHMDVA EKHPALLIGT FWAATSNRQT  900
GSIWAREPLA ATDEIRKPSP AMTLRSGSGP SGELSSELIG DELVRWPKEA ENGALAEYGD  960
KTRSASGFTP KTSQGIKECA TKLGIQGARD LNGAHHGERS VWRYPAQSLV PEREGESRGS  1020
PPPRCFPCGA G
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00092.1.g00230.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9566451e-118EU956645.1 Zea mays clone 1569257 PIL5 mRNA, complete cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31073677
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59060.13e-27phytochrome interacting factor 3-like 6