PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00062.1.g00200.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family BES1
Protein Properties Length: 433aa    MW: 45534.3 Da    PI: 9.6108
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00062.1.g00200.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222082.6e-64932412148
                          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..ee 78 
                                     g+ r ptw+ErEnn+rRERrRRaiaaki+aGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+  e+
  Zpz_sc00062.1.g00200.1.sm.mkhc  93 GGARVPTWRERENNRRRERRRRAIAAKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPaaER 171
                                     688************************************************************************9999 PP

                          DUF822  79 aeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvss 148
                                     ++++g+sas sp+ss+q        +sp +sy++sp+sssfps+ s+++++l  +        +sl+p+l++ls+++s
  Zpz_sc00062.1.g00200.1.sm.mkhc 172 HDSIGQSASPSPCSSYQ--------PSPQASYNPSPASSSFPSSGSSSHLTLGGNnfiggvegSSLIPWLKNLSSSPS 241
                                     *****************........88999999999999999999888888887788888888*********998655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.3E-6993237IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MPWLPLVPAP GFAERVARAS TRDAAAVGAA SGGCVHTTTT TSSSSSFLLG GSNKQNPGQG  60
RAGQGRGGTR RRTAGRIREI RRMTTAGGGG GLGGARVPTW RERENNRRRE RRRRAIAAKI  120
FAGLRAYGNY NLPKHCDNNE VLKALCNEAG WTVEPDGTTY RKGCKPPAAE RHDSIGQSAS  180
PSPCSSYQPS PQASYNPSPA SSSFPSSGSS SHLTLGGNNF IGGVEGSSLI PWLKNLSSSP  240
SFASSSKFTQ IQHLYFNGGS ISAPVTPPSS SPTRTPRFKT DWENPSVQPP WAGENYASLP  300
NSTPPSPGRQ VAPDPAWLAG FQISSAGPSS PTYNLVAPNP FGIFRETVAS SSRMCTPGQS  360
GTCSPVMGDV PAHRDVQMGD GAPDDFAFGS SSNGNNESPG LVKAWEGERI HEECVSDELE  420
LTLGSSKTRA DPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A9e-2496166372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B9e-2496166372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C9e-2496166372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D9e-2496166372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00062.1.g00200.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025813584.10.0protein BZR1 homolog 3
SwissprotQ5Z9E50.0BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLA0A1E5VA880.0A0A1E5VA88_9POAL; Protein BZR1-like protein 3
STRINGPavir.J12085.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-63BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]