PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00001.1.g01650.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Dof
Protein Properties Length: 465aa    MW: 48515.8 Da    PI: 9.0225
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00001.1.g01650.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.6e-3984144262
                        zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                                   +e+alkcprCdstntkfCyynnyslsqPr+fCkaCrryWt GG+lrnvPvGgg+r+nk+ss
  Zpz_sc00001.1.g01650.1.am.mk  84 PERALKCPRCDSTNTKFCYYNNYSLSQPRHFCKACRRYWTSGGSLRNVPVGGGCRRNKRSS 144
                                   68899*****************************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-3468140IPR003851Zinc finger, Dof-type
PfamPF027016.2E-3386142IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.72188142IPR003851Zinc finger, Dof-type
PROSITE patternPS01361090126IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MVFTSVPAYL DPPIWNSQQG QQPRASGGGD APLLPVGPAA ATGMAPEATG LPSSSTAAAS  60
AAGAAQTRPN SMAERARVAR MPQPERALKC PRCDSTNTKF CYYNNYSLSQ PRHFCKACRR  120
YWTSGGSLRN VPVGGGCRRN KRSSKSSSAG ASSSSKPSSS ARQLPSGPSS TPSTPGGVTS  180
GIIPSGLNSL SHQYLPFLGS MQQPGGNLGL AFSAGLPPLG MQHVDTGDQF PVASGGASLD  240
QWRVQQQQHQ VQFPFLAGGV LDLQPRLQMY QLGLEANRVS SGSPASAFTL GALGQASGTP  300
ARQEGTMKLD LDDSKGQEMS LQRQYMAALR HGDGIWDGNA GGSGGNGGGN DGATWPMNIP  360
GFCSSSTGDG GDHMASDGGG AARRQAEECV APHAIGRPGH QRQRVNQKQR GKKTGPRTTS  420
KADEMSEADQ SEQRTEAKAR LEEGHACQAD SNWGSFTFST PIMCC
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00001.1.g01650.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025791451.11e-141dof zinc finger protein DOF5.1-like isoform X2
TrEMBLA0A2S3IRW01e-140A0A2S3IRW0_9POAL; Uncharacterized protein
STRINGPavir.J14669.1.p1e-138(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP123012432
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.19e-40Dof family protein