PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc13655.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 179aa    MW: 20220.5 Da    PI: 5.1674
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc13655.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.21.6e-19311517128
                           NAM   7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk..a 85 
                                   F+Pt++elv ++L+++++g + +++ ++ e+d +++ PwdL +++   +++ +fF+ r ++ +     +r++  g W   a
  Zmw_sc13655.1.g00010.1.am.mk  31 FDPTEDELVLHFLRPQLRGFPPRVAGAVVEADPCSAAPWDLLARYGL-RDQGHFFAARGRSRP---SVRRSVGGGAWMrsA 107
                                   9***********************999**************855544.5678******99987...689999*****8557 PP

                           NAM  86 tgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                                   t + ++v + +  + + +  + fy  g+  k ++t Wvm+ey++
  Zmw_sc13655.1.g00010.1.am.mk 108 TKSGRSVSDLGLVVRWRRAKFCFYmIGEVGKQRSTGWVMEEYEV 151
                                   7778899888888999999*****6578888899********86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100526.67225177IPR003441NAC domain
PfamPF023652.6E-1231151IPR003441NAC domain
SuperFamilySSF1019414.18E-2931176IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MADEANLSAE EKEEEEHDGD AADLSSSADV FDPTEDELVL HFLRPQLRGF PPRVAGAVVE  60
ADPCSAAPWD LLARYGLRDQ GHFFAARGRS RPSVRRSVGG GAWMRSATKS GRSVSDLGLV  120
VRWRRAKFCF YMIGEVGKQR STGWVMEEYE VTDPQCYRRD DEGEEDGYWV LCRVRKSRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025816116.14e-82NAC domain-containing protein 18-like
TrEMBLA0A0A9C0L51e-95A0A0A9C0L5_ARUDO; Uncharacterized protein
STRINGSb03g045610.13e-74(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP137612528