PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc12562.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 188aa    MW: 21089.6 Da    PI: 8.9546
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc12562.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.88.3e-14213214128
                           NAM  14 lvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat...gkrknra 77 
                                   l+++yL+kk++g +    l+ +  +++ d++++ P+ L +          + +++ ++ yfF+k++   ++    +r+ + 
  Zmw_sc12562.1.g00010.1.am.mk   2 LINHYLRKKIDGAEvfsnLTNAAYFHDEDVCSARPEVLVRahtmparvpsREAGDGQQFYFFTKARFIGNKlnmRSRTIKN 82 
                                   89************8865444356**************7446777766543223555778888877555441013344443 PP

                           NAM  78 tk.sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                   t  + +W+a g++k+v     ++    + L ++ ++ pk  ek  W+m ey++
  Zmw_sc12562.1.g00010.1.am.mk  83 TGdKETWHAEGRTKPVDG---TADAYITKLSYHVKTGPKtVEKPGWIMTEYTM 132
                                   334778**********77...34455667889965555415799*******87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.8351151IPR003441NAC domain
PfamPF023651.6E-82131IPR003441NAC domain
SuperFamilySSF1019412.75E-152137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
LLINHYLRKK IDGAEVFSNL TNAAYFHDED VCSARPEVLV RAHTMPARVP SREAGDGQQF  60
YFFTKARFIG NKLNMRSRTI KNTGDKETWH AEGRTKPVDG TADAYITKLS YHVKTGPKTV  120
EKPGWIMTEY TMSDGKRKAA DDLGEATPST RPRQIDEDRQ HAAVLEFGAE RSQLTQDMPA  180
NSNSNSAL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545