PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc09075.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 417aa    MW: 45384.5 Da    PI: 8.4783
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc09075.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1361.6e-11135176445
                                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                                    k++rr+++NReAAr+sR RKka+ie+Le   ++L    ++L
  Zmw_sc09075.1.g00020.1.am.mk 135 HKVQRRLAQNREAARKSRIRKKAYIEQLESGRAKLAHLEQEL 176
                                   699**************************8777776655544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.8E-9128178No hitNo description
SMARTSM003382.0E-6132220IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.197134178IPR004827Basic-leucine zipper domain
PfamPF001701.3E-8135176IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.54E-7136179No hitNo description
PROSITE patternPS000360139154IPR004827Basic-leucine zipper domain
PfamPF141441.4E-29210285IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MPACVFSRFL ARALAWTDAM WCEGPNPSSK SSSSLTAATF APPVATAYGG VAASLGMAAT  60
GTVITDAGRF CPPWTQFENW GDSGVVVTSP LTETTSTDVD DSGDKRNAQM GGSSAQRVAV  120
NVDPSVVSKE RQGDHKVQRR LAQNREAARK SRIRKKAYIE QLESGRAKLA HLEQELQRAR  180
QQGMFIASGC SGALAFDMEY ARWLDEHQRH INDLRVALAA QMGDGDLRVL VDAVMSHYDQ  240
AFRLKALATR GDVFHVLSGM WVSPAERFFM WLGGFRPSEV LKAVAAQLEQ PTEQQLVGIC  300
NLRQTSQQAE DALSQGMEVL QQTLAETLAS AAVAGGGAGA GPADSVTNYV GQMAMAMAKL  360
GALENFLRQA DLLRQQTLEQ MRRILSTRQS ARALLVISDY FSRLRALSSL WLARPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014660509.20.0transcription factor TGAL3
SwissprotQ5Z6N91e-174TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBLA0A0A9BRJ30.0A0A0A9BRJ3_ARUDO; Uncharacterized protein
STRINGPavir.J20659.1.p1e-178(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]