PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc08745.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 377aa    MW: 40542.7 Da    PI: 10.7349
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc08745.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.51.8e-10300359463
                                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                    kr +r   NR++A +s +RK +++ eLe++v +L+ e ++L+ ++e+ + e+ +lk+++
  Zmw_sc08745.1.g00020.1.sm.mk 300 PKRVKRILANRVSAAKSKERKVKYMGELERRVHVLQMETSTLAAKVEREQRESVALKTQN 359
                                   5999********************************************999999999987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-13297361IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.473299362IPR004827Basic-leucine zipper domain
PfamPF001702.8E-9301359IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-9301358No hitNo description
SuperFamilySSF579595.91E-10301357No hitNo description
CDDcd147039.28E-21302351No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MDDGRGDPAR RRLLSPPAGG QGQGLRLPPR APATDLYSQF QRRFSHSLFL PPPMVPRFPS  60
AASGSGSAFS YYQGTPGLSQ PPFFSVDHQR PFIYAGQAAG AVTRSPLSLG AEQGPSSVLP  120
PRGAGHRRSR SDFLFGLSRP NMSVPVPPAV EAAALDSVFG SYRVMGTLGS VVNGAEERHD  180
HARFPRLWIP ANSSDNKAEN LAAAGVRGAG PSNPRHCRSL SVDSFMGNLN FETVGQESPN  240
LPLTSPAAGN GAGLSRTGSG SFGGPPAPTD LVIPNGEFSE ADRKKIMAND HLAEIAQTDP  300
KRVKRILANR VSAAKSKERK VKYMGELERR VHVLQMETST LAAKVEREQR ESVALKTQNN  360
EMRIRVQALE QHAQLKD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025803483.11e-119transcription factor RF2a-like
TrEMBLA0A3L6QQY61e-121A0A3L6QQY6_PANMI; Uncharacterized protein
STRINGPavir.J03608.1.p1e-116(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP148701820