PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc07540.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 172aa    MW: 17119.7 Da    PI: 4.5643
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc07540.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.72.9e-132421356
                           AP2 13 grWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                                  gr++AeIrdp     r + ++lg+f++ae Aa+a++aa+++l+g+
  Zmw_sc07540.1.g00010.1.am.mk  2 GRYAAEIRDP---A-RkTPIWLGTFDSAEAAARAYDAAARSLRGA 42
                                  9********8...2.35*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.687149IPR001471AP2/ERF domain
SMARTSM003802.4E-18155IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-15250IPR016177DNA-binding domain
PfamPF008472.0E-6241IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-21250IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
SGRYAAEIRD PARKTPIWLG TFDSAEAAAR AYDAAARSLR GAAARTNFSA SASAQVAAPS  60
PAIPPAATVA AAATSSHSST VESWSGGGGG GRIGAPGATI AGATRAAPAA EEDCRSYCGS  120
SSSVLCDDGV SSAGDEAVAP PTRSSPLPFD LNVADPAAPD EMDWRCDTIL HL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025801489.16e-54ethylene-responsive transcription factor 3-like
TrEMBLA0A3L6RRN23e-49A0A3L6RRN2_PANMI; Ethylene-responsive transcription factor 3
STRINGGRMZM2G322672_P014e-47(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61022347