PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc07173.1.g00030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TCP
Protein Properties Length: 193aa    MW: 20339.1 Da    PI: 10.5254
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc07173.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP112.46.5e-3541123392
                           TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.seceaesssssa 82 
                                   +k + ++++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++t+eWLl+qa+p+i ++tg+++s+a  +c   ss  s+
  Zmw_sc07173.1.g00030.1.sm.mk  41 KKPSGSKDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTVEWLLRQAEPSILAATGSGTSPAvFSC---SSAPST 118
                                   5666789********************************************************999995444...222222 PP

                           TCP  83 snsssgkaak 92 
                                   s+s     ++
  Zmw_sc07173.1.g00030.1.sm.mk 119 SSS-----SR 123
                                   211.....11 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.5E-3045134IPR005333Transcription factor, TCP
PROSITE profilePS5136926.7346100IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MASREHAAAT FHQVYQPTPA PMSLAALAPT DAAVAMAPAR KKPSGSKDRH SKVNGRGRRV  60
RMPIVCAARV FQLTRELGLK SDGQTVEWLL RQAEPSILAA TGSGTSPAVF SCSSAPSTSS  120
SSRSLLLGKR PRQDVDEAPP PLWAAMQARP VGVAWGLSTP AQEQAYASAA QGHCLNLLSV  180
LSGTTKPAEE ESR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004976294.17e-66transcription factor PCF1
SwissprotQ9FMX22e-37TCP7_ARATH; Transcription factor TCP7
TrEMBLA0A0A9DEW83e-83A0A0A9DEW8_ARUDO; Uncharacterized protein
STRINGTraes_2BL_4B6057E06.11e-69(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP194133100