PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06981.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 291aa    MW: 31688.1 Da    PI: 10.0264
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06981.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM87.13.4e-2757463128
                             NAM  63 krdkkyatgkrknratksgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                      rd+ky+tg r+nrat++gyWk+tgkdke+++     + elvg+kktLvfykgrap+gekt+Wvmheyr+
  Zmw_sc06981.1.g00020.1.sm.mkhc   5 LRDRKYPTGVRTNRATNAGYWKTTGKDKEIYTGqppaTPELVGMKKTLVFYKGRAPRGEKTNWVMHEYRV 74 
                                     689****************************9766666677***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100535.945195IPR003441NAC domain
SuperFamilySSF1019411.23E-32495IPR003441NAC domain
PfamPF023651.8E-121374IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MPLSLRDRKY PTGVRTNRAT NAGYWKTTGK DKEIYTGQPP ATPELVGMKK TLVFYKGRAP  60
RGEKTNWVMH EYRVHSKSTS KSTKDEWVVC RVFAKSAGVK KYPSNNSHSR SHHHLHHPYT  120
LDMVPPLMPT LLQHDPFARH HHHPYMTPAD MAELARLARG TPGLHPHIQP HPGGFINPTA  180
PQFAIHGLNL NLGASPAMPP PPPPQPALHA AMTTSMTAMG HHTAPSAAGP GGHVMGSEQQ  240
QQMAPGLGGC VMTLGAGPDG GFAGTDGVRY QNLDVEQLVE RYWPGAAGYQ V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A9e-26310176171NO APICAL MERISTEM PROTEIN
1ut4_B9e-26310176171NO APICAL MERISTEM PROTEIN
1ut7_A9e-26310176171NO APICAL MERISTEM PROTEIN
1ut7_B9e-26310176171NO APICAL MERISTEM PROTEIN
4dul_A9e-26310176171NAC domain-containing protein 19
4dul_B9e-26310176171NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008652880.11e-135NAC domain-containing protein 92
TrEMBLA0A3L6QN811e-140A0A3L6QN81_PANMI; Uncharacterized protein
STRINGPavir.Ba01665.1.p1e-138(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP93613846