PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06792.1.g00040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 527aa    MW: 58130.5 Da    PI: 6.0201
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06792.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.39.6e-13131475128
                           NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeek....ewyfFskrdkkyatg 71 
                                   f F P+d  lv + L++k++++++  +  +++ d+++v P++L +          +    e     ++yfFs+++   a+ 
  Zmw_sc06792.1.g00040.1.sm.mk  13 FTFTPSDARLV-DSLRAKIANQEVAHAVYFRDDDVCSVRPEELVRrhgkparvnpR----EAgdgfQYYFFSTARFVGASR 88 
                                   89*********.77*********888566**************7445667654332....222235789999988888877 PP

                           NAM  72 krknratk....sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   ++++r+++    + +W+a  + k+v      +  +   L ++ +  +  +k  W+m ey++
  Zmw_sc06792.1.g00040.1.sm.mk  89 TKRSRIIEgtdkKETWHAETSLKQVEG--AVDGFMMVKLSYHVKIGEIVQKPGWLMTEYSF 147
                                   777776443334788****99999977..6667788889***88888899*********86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.7639161IPR003441NAC domain
PfamPF023651.2E-713146IPR003441NAC domain
SuperFamilySSF1019411.7E-1413161IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MAALGAAADD DSFTFTPSDA RLVDSLRAKI ANQEVAHAVY FRDDDVCSVR PEELVRRHGK  60
PARVNPREAG DGFQYYFFST ARFVGASRTK RSRIIEGTDK KETWHAETSL KQVEGAVDGF  120
MMVKLSYHVK IGEIVQKPGW LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA PSSSSAGKRK  180
AEDDLEGETS SMRQRHENVA APEFAEHVEE SQPEPQIAPA TFEFDGNITF TLEELTNFPT  240
GDVHTGFGVL TDGESIAAYA SGGTIDELIP STMEEVQPES EVPPASTDGS MTFEELWQLL  300
DTDVVDDGAY LQLPADEILA EEWLKDKETL QHVHIDRAAG DAMMFLQRSR PVNPRKRPPP  360
ALLSWSTPPR ASAPGPVPPT PRVAPPAASP HDPARAEPPP REATYALCRR CARRIAAAGP  420
RGEADRRAVP DRWLGFIFDT DTFVKKLVEV LSVPPFRLMD MIISLPDTVG IVSSPGAKRH  480
VKVPEDLDRF QATAEGAASC RRKQKDWRLQ TSFKAMKKGP STWTQTR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545