PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06792.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 378aa    MW: 41496.2 Da    PI: 4.6227
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06792.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.62e-13531875128
                           NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvka.eek..ewyfFskrdkkyatgk 72 
                                   f F P+d  lv + L++kv++++++ +  +++ d++++ P++L +          +  + + +  ++yfFs+++   a+ +
  Zmw_sc06792.1.g00020.1.am.mk  53 FTFTPSDARLV-DSLRAKVANQEIPHAVYFRDDDVCSLRPEELVRrhgkparvnlR--EaG-DglQYYFFSPAHFVGASRT 129
                                   89*********.77*********999667**************7446777755332..222.23588*****999988877 PP

                           NAM  73 rknra....tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   +++r+     k+ +W+a  + k+v      +  +   L ++ +  +  +k  W+m ey++
  Zmw_sc06792.1.g00020.1.am.mk 130 KRSRIiggtEKKETWHAETSLKQVEG--AVDGFMMVKLSYHVKIGEIVQKPGWLMTEYSF 187
                                   77886455444788******999977..6667788889***88888899*********86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.14149201IPR003441NAC domain
SuperFamilySSF1019411.57E-1551201IPR003441NAC domain
PfamPF023652.2E-853186IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
LPKIQINRYS HHPSSPPPIS SRTPPRFAPS NSIAAVSPEI MAALGAAADD DSFTFTPSDA  60
RLVDSLRAKV ANQEIPHAVY FRDDDVCSLR PEELVRRHGK PARVNLREAG DGLQYYFFSP  120
AHFVGASRTK RSRIIGGTEK KETWHAETSL KQVEGAVDGF MMVKLSYHVK IGEIVQKPGW  180
LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA SSSSSAGKRK AEDDLEGETS SMRQRHENVA  240
APEFAEHVEE SQPEPQIAPA TFEFDGSITF TLEELTNFPT GDVHTGFGAL TDGEVIAACA  300
SGGTVAELIP STMEEVQPES EVPPASTDDS MTFEELWQLL DTDIVDDGAY WQLPADEILA  360
EEWLKDKETL QHVPLSDF
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545