PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06704.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 440aa    MW: 46127.6 Da    PI: 10.0068
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06704.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.71.2e-122421356
                           AP2 13 grWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                                  gr++AeIrdp     r + ++lg+f++ae Aa+a++aa+++l+g+
  Zmw_sc06704.1.g00010.1.am.mk  2 GRYAAEIRDP---A-RkTPIWLGTFDSAEAAARAYDAAARSLRGA 42
                                  9********8...2.35*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.687149IPR001471AP2/ERF domain
SMARTSM003802.4E-18155IPR001471AP2/ERF domain
PfamPF008478.4E-6241IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-20250IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-15250IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
SGRYAAEIRD PARKTPIWLG TFDSAEAAAR AYDAAARSLR GAAARTNFSA SASAQVAAPS  60
PAIPPAATVA AAATSSHSST VESWSGGIGA PGATIAGATR AAPAAEEDCR SYCGSSSSVL  120
CDDGVSSAGD EAVAPPTRSS PLPFDLNVAD PAAPDEMDWR CDTTCALLLR RDRNSTDRRQ  180
KVNQIKSNAC SFAFKSIRTQ SACCKRPSRQ GPGGIMASLK IESPSSSARP VCVCLRTGRH  240
SPCDLLRDRS VARRESVTSP PTRVLPVATC VCGAGLKRER EREAGRREDV NPGREEAVSF  300
SPATVVPSGS AEEGNSGRNL RKACRHPACG LHSTCFARSC AALSAGETGA HPCPVPNGKA  360
RATAEWKTVT VQHASRQTCD YPGDLSRARQ LWHRRPPVAR RKGTPELGMR RGRDSSAGPR  420
AHTHRPKLPA RGASIGTNGA
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61022347