PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06498.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 445aa    MW: 49681.3 Da    PI: 10.9179
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06498.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.52.5e-161059255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  +y+GVr +k +g+WvAeIr+p +   r+r++lg++ t+  Aa+a++ a  +l+g
  Zmw_sc06498.1.g00010.1.am.mk 10 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYATPVAAARAYDTAVFYLRG 59
                                  69*****99.**********732...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.4E-30968IPR001471AP2/ERF domain
PROSITE profilePS5103222.5891067IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-211069IPR016177DNA-binding domain
SMARTSM003807.9E-361073IPR001471AP2/ERF domain
PfamPF008476.8E-101059IPR001471AP2/ERF domain
PRINTSPR003671.7E-111122IPR001471AP2/ERF domain
CDDcd000184.94E-251368No hitNo description
PRINTSPR003671.7E-114969IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
QHQQQQPRRQ YRGVRMRKWG KWVAEIREPH KRTRIWLGSY ATPVAAARAY DTAVFYLRGR  60
SARLNFPDEI PALALSEGGD ADGGTLSAAS IRKKAIEVGS RVDALQTGMM VAPPPHHCER  120
PRHNHHHHHQ HRELQLLGDE HHQHEQKPPP QQPRAAWSGR AKNPDLNRAP SPESSDADMP  180
FPSPRMIQHN QPPAGSIPST YSVGGRFFDT TSGWPWPAGR RTTSPFLLGV IHGVVCKQDR  240
GKVRRTQSCM MGTAFLLTVL DDAPAAVRAC RPFISCTGIW PCVAMMGWER IGRRNDNSSR  300
SSDMCAGPGA RLVVAQFMNE HMPGVMQNMD RRSRERDDRG AIPSSLCAPR FFHSHPELVP  360
RCTRPDKPCL VGSLAEEREG GRRHAAVLSG HQLRLSQPFL ASSSPPHRPS KSPTKRAKAS  420
SDGWVRLLPR SRNEMGRETT AQDSD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1310701475Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00276DAPTransfer from AT2G23340Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39433075