PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06457.1.g00030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 225aa    MW: 25347.8 Da    PI: 8.5934
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06457.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-184898155
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  s++ GVr+++ +grWvAeI+d +   ++ r +lg+f tae Aaka+++a++ l+g
  Zmw_sc06457.1.g00030.1.sm.mk 48 SKFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEAAAKAYDEAARLLRG 98
                                  79********.7*********32...35***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.29E-1648105No hitNo description
PfamPF008472.1E-124898IPR001471AP2/ERF domain
SuperFamilySSF541715.36E-1948107IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.3E-2749106IPR001471AP2/ERF domain
PROSITE profilePS5103219.83649106IPR001471AP2/ERF domain
SMARTSM003805.8E-3449112IPR001471AP2/ERF domain
PRINTSPR003673.6E-75061IPR001471AP2/ERF domain
PRINTSPR003673.6E-77288IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MELHFQLQPP AVSFQVDDYC YYYYQQEAAA QAKPVKPRGR KKGSNNHSKF VGVRQRPSGR  60
WVAEIKDTTQ KIRMWLGTFE TAEAAAKAYD EAARLLRGAD TRTNFTPRIS PDCPLAVRIR  120
GLLHHKKVKK QAKEFDSWMF DSAFGQFPAL DGFPAAADSS VPAAPALEEP RPAAAPGEMV  180
EFERIKVERR ISASLYAMNG LQEYFDRVFD ASACDSLWDL SPLCH
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002281619.11e-61PREDICTED: ethylene-responsive transcription factor RAP2-11
TrEMBLA0A0D3GSP74e-70A0A0D3GSP7_9ORYZ; Uncharacterized protein
STRINGVIT_08s0007g07250.t014e-61(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39003273