PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06031.1.g00040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 680aa    MW: 72286.8 Da    PI: 10.7494
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06031.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.62.4e-11244292254
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                                   +y+GV+  ++ +++ A I+dp++   ++r++lg+++t+eeAa a++aa + ++
  Zmw_sc06031.1.g00040.1.am.mk 244 RYHGVT-SRYGNKFGAMIQDPKT---KRRVWLGTYDTPEEAACAYDAAVRTMK 292
                                   699**9.67799********954...5*********************98876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003807.8E-16244306IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-13244300IPR016177DNA-binding domain
PROSITE profilePS5103214.341244300IPR001471AP2/ERF domain
CDDcd000183.00E-15244302No hitNo description
Gene3DG3DSA:3.30.730.101.3E-18244301IPR001471AP2/ERF domain
PfamPF008478.1E-5246291IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 680 aa     Download sequence    Send to blast
MTRTNGLRAP HTCPITSSTD PAAAKFFLSE AIAGVDATGG RSPRAWRFSF GSRPGSEGRR  60
PKRPNPSREP GPRSPEDPPL QPTLLKGLRR VCMLRPNKYT NPDGPERSSY SSPSRAPLKR  120
KLTAPARSRS HSSSPPALKS ELPPRARTRV TRPKIPEQKR KERLVCSALQ QWQAMKQRGG  180
ASETRAGGCL YGMHNISLNN PLALGQQWGL GMEGSIREYA RRAGAKVRAD RTAQGREPSS  240
PGRRYHGVTS RYGNKFGAMI QDPKTKRRVW LGTYDTPEEA ACAYDAAVRT MKSNPKFNFP  300
ELIRGEEEKS AAAVLAHFAE TKRKRKLAEE AVPPPSAPAP AGDVVGLPEP PTSFPGEEDA  360
LAALKMLQGH GEASSKNKAL EAVVSSLSPA PSSSSAPAAP TSHYASTPVS TAFKNPFFVP  420
TSAGSASAFR FTTPVLTPAL LNFMFPTSHA MALPPSFHSE PSPAAPSPPA PAPAVHSVPV  480
FDPAPLAFHY PNWSAPPPGF HLAPAPAAPA DKSVVSTAPS SSALAPAPDN ASASHFASFF  540
APTPAPPAAF HLPDTTAPPP GFHPAPAPAA PATTPLTWQL MYQRHLALSS LQAQQSLRTL  600
RPLLSMSPLG AAIMNTSSVS QPYGSSSSGA PEISEAELAG YRSLYRMLER EAAGGGLGDV  660
RIDDPGTQDR SRKKKRRGEA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1672676KKKRR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3533334