PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05821.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 452aa    MW: 50203.4 Da    PI: 4.236
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05821.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.67.2e-211080272
                             NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgk 72
                                    ppGfrF+Ptdeelv ++Lk+++++ + +    i++vd+yk++P++Lp+  ++++++++w+fFs+ d+ky++g+
  Zmw_sc05821.1.g00010.1.sm.mkhc 10 PPGFRFSPTDEELVLYFLKRRIASGRPTP--YIADVDVYKFHPSHLPErsALQTGDRQWFFFSRLDRKYPNGS 80
                                    8*********************9999555..6**************94357888999*************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-22781IPR003441NAC domain
PROSITE profilePS5100518.399147IPR003441NAC domain
PfamPF023651.0E-91074IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MENPPPRRWP PGFRFSPTDE ELVLYFLKRR IASGRPTPYI ADVDVYKFHP SHLPERSALQ  60
TGDRQWFFFS RLDRKYPNGS PIEEQADREL TVGELEELLS EFGNDQDQGE APLDFSTPTS  120
QCQGWFNDAG NKLESVDTTT VSGALPVVEN CQHEDHQVWL DADKGEEVDA TGPIVNSGAV  180
VTAGCIGSEI LDGDLERLLL QIASDQGMFE PISDFSAPFP HHNLNQVGIG DFVSPGNPVG  240
TLPCIVQGSK DFDPRIGPSS QIPESNLTNV PFNAETKSAE GTSAQYSVSG SVNYNCQDAN  300
EEFLEINDFF DLDDVEQNVN CTANEHLISS TNVIFENLEY SDAPLLLPGH SDTAEMVAEN  360
QFVDFVNSGI QNQEYQYTTE VRTQSQIALN VQSHMKHNHV VLSSHTSGHS KLQMKKTLLF  420
TRQFSVSLAS SRSMLQVKDQ SLQLLRLQEV SD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-1910801685Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004957233.11e-121uncharacterized protein LOC101780745 isoform X3
RefseqXP_022679825.11e-121uncharacterized protein LOC101780745 isoform X2
TrEMBLA0A0A9K7P31e-132A0A0A9K7P3_ARUDO; Uncharacterized protein
STRINGSi029088m1e-121(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91282840