PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05499.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 144aa    MW: 15189.4 Da    PI: 4.3977
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05499.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.95e-08125144222
                           AP2   2 gykGVrwdkkrgrWvAeIrdp 22 
                                   +++GVr+++ +g+W+AeIrdp
  Zmw_sc05499.1.g00010.1.am.mk 125 RFRGVRQRP-WGKWAAEIRDP 144
                                   69*******.**********6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.456125144IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-8125144IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MSGGWWWKPA DQEDVDGAAA TAPVLSGEYQ ALEMSTMVSA LAHVVAGGDD DPEAMVGGEY  60
AHAPPALQGG GYYYSDASAP TPDQHFAAAG DQEQSRHDVQ GAAAATMDEH HQSPTPAAEA  120
SGGRRFRGVR QRPWGKWAAE IRDP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010231329.21e-23ethylene-responsive transcription factor ERF110
TrEMBLA0A2T7EDC73e-31A0A2T7EDC7_9POAL; Uncharacterized protein
STRINGPavir.J02402.1.p2e-24(Panicum virgatum)