PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05434.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 426aa    MW: 47084.9 Da    PI: 9.121
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05434.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.93.3e-221122435128
                           NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr..at 78 
                                   f+ +P+d el+  yL++ ve+       +i+++d+y  eP +L +     + + +e+ wyf ++ ++k++ gkrk+r  at
  Zmw_sc05434.1.g00020.1.am.mk 112 FHTQPSDLELLRSYLRPWVESGLKAG-AFIHDADVYADEPARLTEtfapaASQDGERAWYFLTPLHRKSEGGKRKSRtvAT 191
                                   5668***************9988555.78**************74467755566888********************7668 PP

                           NAM  79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    +g W++  k+k+v++   ++++vg ++++ f k++ +   +t W+m e rl
  Zmw_sc05434.1.g00020.1.am.mk 192 GEGWWHNEAKSKPVVDGldGRRHVGYRQSFSFMKKEGSLRIRTGWLMLELRL 243
                                   89*************98888899**********9999999*******99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100532.362108262IPR003441NAC domain
SuperFamilySSF1019412.35E-29112262IPR003441NAC domain
PfamPF023659.4E-13112243IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MLRVRYGGCA DGEIERFTLS TPTVHRPQRK SRWPGGIRLV SDLLALPCPL RLGDELDSES  60
EVRNRPRFLR LFGYARPPPP LGRPLSVSVY MVRSPTTPPP TPNGKLAPNA PFHTQPSDLE  120
LLRSYLRPWV ESGLKAGAFI HDADVYADEP ARLTETFAPA ASQDGERAWY FLTPLHRKSE  180
GGKRKSRTVA TGEGWWHNEA KSKPVVDGLD GRRHVGYRQS FSFMKKEGSL RIRTGWLMLE  240
LRLGDAEDPR EGGLVLCKVY RSPRHPGTIT CPAARDQLPR PERKTNDDER SDAAAGRRKF  300
DGEGSSAATP RITYEAIPDT AAAAARGRKE KAADDNDDSD ETWLNSPDSK RKAANDETSV  360
AASAAEHAQS KRKTEGGLHY CPQCGFHLDA VMAAVNAKSS ETKSEVGIVQ VQGDSLVKDH  420
SFHQFI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969524.21e-79protein ATAF2
TrEMBLA0A368R9323e-78A0A368R932_SETIT; Uncharacterized protein
TrEMBLA0A3L6SNQ31e-78A0A3L6SNQ3_PANMI; Protein ATAF2-like
TrEMBLK3XIX72e-78K3XIX7_SETIT; Uncharacterized protein
STRINGSi001850m3e-79(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40112972