PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05318.1.g00070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 538aa    MW: 57381.1 Da    PI: 8.3891
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05318.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.7e-184594255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                   y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  Zmw_sc05318.1.g00070.1.am.mk 45 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAARAIKG 94
                                  69****998.**********843...6***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.3E-3145102IPR001471AP2/ERF domain
SMARTSM003803.0E-3545108IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-2045102IPR016177DNA-binding domain
PfamPF008472.5E-114594IPR001471AP2/ERF domain
PROSITE profilePS5103222.53745102IPR001471AP2/ERF domain
PRINTSPR003674.2E-104657IPR001471AP2/ERF domain
CDDcd000183.18E-2846102No hitNo description
PRINTSPR003674.2E-106884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    Send to blast
MDDAHEPTSP TSASSTSSSS SSSSSLVGAA PKKRPRNREG LRHPTYRGVR MRSWGKWVSE  60
IREPRKKSRI WLGTFATAEM AARAHDVAAR AIKGRAAHLN FPGQAHLLPR PTSAAPKDVQ  120
AAAALAAAAA DFPSDANAKS PESSSSSSDD ASVSFPPPPP PLQREDALPD PDESLFDLPD  180
LLVDLRCGPS SCGASWAVDD DVAGGAAFRL EEPLIGFERA GHPVSLSLSD SEQAPPPAHH  240
STQQERSYNL PMPLDQTLSS AGDVRRGLVE KLKTTLMRLS SEFGRSAPLP RAPGCGFPCP  300
VATVPATSNA ARARERPQAD AARCLPVGFR ARDPVSQSPV RRCDASWRRH APRPGSFCFV  360
PLRDKDDDDS WRLRDPDWPQ PRLPRTETQS DREIAASSIP GKITLTHAAA TDLPGRSVSW  420
SAGHSCADDG VKNCVLAPPA GDCCGSPGVL RLVTSVTCWA KALSEVSPTK STRQAETRQT  480
HARAPGWQAC ASQSWWYGDT DHVVRALHPA GFGRTRPALE HSYASAVPVP GAGTLTPP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1740107977Ethylene-responsive transcription factor ERF096