PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05210.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 380aa    MW: 41439.8 Da    PI: 7.1702
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05210.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.84e-1283114233
                                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLee 33 
                                     +++k+ rr+++NReAAr+sR+RKka+i+ Le 
  Zmw_sc05210.1.g00020.1.sm.mkhc  83 PSDKALRRLAQNREAARKSRLRKKAYIQALES 114
                                     589***************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-582142IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.5E-783119No hitNo description
PfamPF001707.2E-984114IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.49E-686119No hitNo description
PROSITE patternPS00036089104IPR004827Basic-leucine zipper domain
PfamPF141447.8E-27172244IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
YDRRARQQPF PAWAGEPPFR ADSVAAQAVA TGAPPPAAVV GFVEPEVKFV SRVAVAEDDA  60
PLADSPGPPS SDSFGHDRDD AGPSDKALRR LAQNREAARK SRLRKKAYIQ ALESSRLKLA  120
WMEQELAAVR RPQGAFVGGS VGESAPTLVD SGVAAFEMEY ARWMEEQARQ AGELRAALQS  180
DASELHLRVL VDAGLAHYDA LFGAKSAAAR RDAFFVLSGA WRAPTERFFH WIGGFRPSEV  240
LKTLEPQLEP LAEQQREEVR ALQQTARQLE DALSQGLDKL QQTLTEALLA TTTAIDAPHD  300
GGGGYANVPP QQQMAGVLGR LDGLPGFVDQ ADHMRQQTLR NMRKILAPRQ AARGLLALAD  360
YCQRLRALSS LWAVRPREPA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820316.11e-140transcription factor TGA2.3-like isoform X2
SwissprotQ93ZE21e-108TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A0A9HNG71e-149A0A0A9HNG7_ARUDO; Uncharacterized protein
STRINGSb07g004900.11e-136(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]