PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04988.1.g00050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 752aa    MW: 81676.8 Da    PI: 9.9637
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04988.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75e-17163213156
                           AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                   + y+GVr++   g+Wv+eIr+       +  r++lg++ t+e+Aa+a++aa+++l+g+
  Zmw_sc04988.1.g00050.1.am.mk 163 PVYRGVRFR--AGKWVSEIRElR-----KpSRIWLGTYPTPEMAAAAYDAAALALRGA 213
                                   68*****96..5*********66.....68*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.0E-11163212IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.8E-25164221IPR001471AP2/ERF domain
PROSITE profilePS5103218.966164220IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-17164221IPR016177DNA-binding domain
SMARTSM003801.1E-23164226IPR001471AP2/ERF domain
PRINTSPR003671.0E-5165176IPR001471AP2/ERF domain
PRINTSPR003671.0E-5202222IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 752 aa     Download sequence    Send to blast
MRPSTKFCWS YQRCELPSSA FRHLDRPATT IDRVPVTSSC TSRTKRLFRR PPIAPVTPLD  60
VDVASLRGPA VQKPDERVAG SFTRSFPSVE RAGNAFRQVT FARNDLTNSD GFPTRFVRAS  120
GKLCLCTCNA DVLMERGRQD QERFVRPGAS ACVRRARAET RHPVYRGVRF RAGKWVSEIR  180
ELRKPSRIWL GTYPTPEMAA AAYDAAALAL RGAGAALNFP DAARALPXKA VDGGATGRGR  240
SDRDHEPHEV GCSNGDADYE RRDDDGGGGA AMEGGVVDED DVFEMPRLMV SMAEGLMMSP  300
PVLGPPAAAS LEDEDGVSLV WCEMRTRAAA VCWQMDACGI SPDVDTGITL GCMPGSGDVD  360
VARRAVLPHW LPVAWCRPSG LSCAPKHSKA KQLPDLLCTH RHRVERRIET RSYRDRWTES  420
QGGQAVSHAG GASGQHGNTS GARDYRNDGT AGAPISRPKQ NAAGPQLLRA CRASPSIRGG  480
AAGRGNRAGG SAGRRAALCV VLLLETTEQC KLILSEPPVS IAVAPCPHQP RRAGDATPRL  540
GRPRRRWGER GSLEHERSST GDGTTWRGDT VEKARDDDDE PTAAGRYADE RVMRTSDTLE  600
SAPASSLASI EAPWLAAARW EPGAAVQWRK MTPGSSKTKH TLNPRAHANP SDSTTNLAPR  660
PVSPAAWRSP SPPREPQPET STCSRMKTSF NSRSFFYYHP HGRPARARRT AEAARQPRQL  720
PSPLKIARAL QLDAAGHRAR TLALTFCLLL HC
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354