PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04947.1.g00030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 518aa    MW: 57682.4 Da    PI: 7.4861
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04947.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.69e-14641942126
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...lelee....vikevd.iykvePwdLpkkvka..eekewyfFskr.dkkya.. 69 
                                     G+rF+Pt  e+v+++L + ++g+    +   +     i++++ +y+ eP dL  +++    +++ ++F++  ++k++  
  Zmw_sc04947.1.g00030.1.am.mk  64 HLGYRFQPTPREVVSRHLPRLIAGELslmH---DailpYIHDTNvVYDREPDDLAGMFQPtpATDDRFYFTTVvRQKHRpg 141
                                   57*********************9995542...3333359999637888*****843332223345566655404444422 PP

                           NAM  70 tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmhey 126
                                   +  r  r++  g W  +g+   + ++++ +vg  + L +     ++g  tdW+m+e 
  Zmw_sc04947.1.g00030.1.am.mk 142 SAVRYVRVAGPGSWALQGSMDVLDEAGTVKVGELRRLRYK----KNGAYTDWLMEEC 194
                                   3458888999*********88777779999********97....78999******95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-1560199IPR003441NAC domain
PROSITE profilePS5100517.09463214IPR003441NAC domain
PfamPF023654.3E-766193IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MRAREEDEAG QTREASPSPR VKAKRRAERG RGDPSCDLRD VRRLDRGFPR METPPPIEEE  60
SALHLGYRFQ PTPREVVSRH LPRLIAGELS LMHDAILPYI HDTNVVYDRE PDDLAGMFQP  120
TPATDDRFYF TTVVRQKHRP GSAVRYVRVA GPGSWALQGS MDVLDEAGTV KVGELRRLRY  180
KKNGAYTDWL MEECSCACSV KDAVDGDNER VKKRPQPLSL NAATNKKRPP PLSLKSPSPK  240
RIHRAPVAPI SPLPPAGCTT KSTLPSPYRP VAGPSAPTPP ADQAPHPDTP RPAPVSRLPV  300
PFVSPDPLQS TEDAVDDDFD ELFDKLDTML ACEPAGDEET TADPDDSAET VDELVNIIET  360
SSRCHCIILP HLCCRSQGCW EERTALDFHD RLLAVPRCRI KAQTSCSSVY CAVADEVGVR  420
WGYREHQRRS AALPASDVLR KRMDSPAQKF RARQSVDDFV DCTGRLLAVY LHQDRPTILL  480
PRRHAHLVQS ATCHAASRAV SASTMLSFFL HLSWPLLV
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799