PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04579.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 89aa    MW: 9501.04 Da    PI: 10.0098
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04579.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2232e-0762892754
                           AP2 27 krkrfslgkfgtaeeAakaaiaarkkle 54
                                   + r++lg+f++ae Aa a++ a+++l+
  Zmw_sc04579.1.g00010.1.am.mk 62 TKVRVWLGSFDSAEAAAVAHDVAALCLR 89
                                  349**********************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.972989IPR001471AP2/ERF domain
SMARTSM003800.00925589IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-105889IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-76088IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    Send to blast
MDAWIPFLLP VPGTARFLLP PGGRISAAAY RDTAGRVVMR YSAALPAAYK YPASQSHRCP  60
GTKVRVWLGS FDSAEAAAVA HDVAALCLR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1150322