PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04418.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 210aa    MW: 23107.9 Da    PI: 9.5595
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04418.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64.3e-11165193634
                                   HHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeek 34 
                                    err+++NReAAr+sR+RKka++++Le+ 
  Zmw_sc04418.1.g00010.1.am.mk 165 TERRLAQNREAARKSRLRKKAYVQQLETS 193
                                   59************************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579594.25E-7166207No hitNo description
PROSITE profilePS502178.726166210IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-7166196No hitNo description
PfamPF001705.0E-8166197IPR004827Basic-leucine zipper domain
PROSITE patternPS000360167182IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MWPSGPIHSA PRSAGRPAAT TEFGGNSPSV VSTSDSSSAQ NTMSQMSQME LVSPASSAQR  60
QEVMMVTTDD YSYYKPGLAA AAPPPPAPAA APSFQQQPMQ QLHGDHDKHR LVMSPIDEAR  120
HGESVLFFHE QALVRMDRSF GLQHAPARVP VVAFVDGEVG HCAVTERRLA QNREAARKSR  180
LRKKAYVQQL ETSRVRLQQV EHELQRARSQ
Functional Description ? help Back to Top
Source Description
UniProtRequired for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025818708.11e-44transcription factor LG2 isoform X1
SwissprotO490677e-41LG2_MAIZE; Transcription factor LG2
TrEMBLA0A2T8IJA58e-46A0A2T8IJA5_9POAL; Uncharacterized protein
STRINGPavir.Ea03760.1.p2e-40(Panicum virgatum)
Publications ? help Back to Top
  1. Walsh J,Freeling M
    The liguleless2 gene of maize functions during the transition from the vegetative to the reproductive shoot apex.
    Plant J., 1999. 19(4): p. 489-95
    [PMID:10504571]
  2. Schnable PS, et al.
    The B73 maize genome: complexity, diversity, and dynamics.
    Science, 2009. 326(5956): p. 1112-5
    [PMID:19965430]