PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04325.1.g00050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 616aa    MW: 67883.2 Da    PI: 8.5303
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04325.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.7e-10464506754
                                   HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                                   ++ErrRR+r+N++++ Lr+++Pk +      K++  ++L  +++Y+k+L
  Zmw_sc04325.1.g00050.1.am.mk 464 MAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSMLGDTIDYMKEL 506
                                   79*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.79E-4450511No hitNo description
PROSITE profilePS5088815.091457506IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-15461524IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-12463512IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-14464523IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-8464506IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00133558596No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    Send to blast
MSRGHSEARV RSLYETCISR RDFAVKVSEL NPRSRAGQQS GEGDREGELV DEIAWKLMAA  60
DLLPAAPRRH GGGGPWRAAK ARALPGDGSA TVPVTGETAR RPRRRRTSPP VPRPASSLAT  120
CARGRPLSYS VDHSHAMDVV RVMIVKPSVT KKAVFLFKKA LTPRTSVTAL SSTSLTLSYP  180
QKTIGTVEIP SSGRTDYRVT GDGDPSTALP TRRQRPRPSV VVSKSQSGRG RANEAWFDSG  240
GVVVCRAEHC HRCFAGTEKR TSQPDRDASV DLLPLHAVLR ITFSVDGAFE LAIVRDCVVY  300
WTRDRASNRA AEEMELDEQA FLEEILSLRR DAWDCTDAVG DFFFTAAPAM ESDCSFQEHH  360
QRPPNSLSVL PTFTASYDHR KPPPAPGFDC LSDDVYGAST FGGPNAGDYG GEMGFLHVIE  420
PKAPLTEGTG LGICKVEPGL PDSKPPAPLS KKKRVDGMPS KNLMAERRRR KRLNDRLSML  480
RSVVPKISKM DRTSMLGDTI DYMKELLERI KQLQEEMDLQ EQQEAPGVLR VFRELNPNEM  540
VARNTPKFEV ERKEGGETTV EICCAAKPGL LMSTVSTLDT LGLDIQQAVV SCFNDFGMHA  600
SCFKVNYALF LELHQI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199104RRPRRR
2451471KKRVDGMPSKNLMAERRRRKR
3465472ERRRRKRL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP13023799