PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04178.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 357aa    MW: 38872.4 Da    PI: 4.9488
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04178.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM453.3e-14121475128
                           NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat.gkrk 74 
                                   f F+P+d  lv + L++k+ g +++ +  + + d+++v P++L +          + +++ ++ yfFs+++  +++ +k++
  Zmw_sc04178.1.g00010.1.am.mk  12 FMFSPSDRRLV-DILRAKIGGGDFPNAAYFVDDDVCSVRPEELVRkhsmparvrsREAGDGRQFYFFSPESFVSTRtKKQR 91 
                                   89*********.88*********999888**************73367777554322235568899999876655313333 PP

                           NAM  75 nra....tksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                                   +r+      +  W+  g+ k v     ++ g  + + f+ k   ++  k  W+m ey+l
  Zmw_sc04178.1.g00010.1.am.mk  92 KRTidrtSGNECWHGEGSGKLVDG---TNDGYMTKFSFHiKIAGETVAKPGWLMTEYSL 147
                                   343232133567*****9877754...567888889999444667777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.3178163IPR003441NAC domain
SuperFamilySSF1019418.89E-2012163IPR003441NAC domain
PfamPF023652.2E-1012147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MSAFPAAEDD SFMFSPSDRR LVDILRAKIG GGDFPNAAYF VDDDVCSVRP EELVRKHSMP  60
ARVRSREAGD GRQFYFFSPE SFVSTRTKKQ RKRTIDRTSG NECWHGEGSG KLVDGTNDGY  120
MTKFSFHIKI AGETVAKPGW LMTEYSLKGT GAGGWVLCKI YKSPRGPGRS KAPSSLENKR  180
KAADDPEDAR PSTKERRQGQ IDANGDLEGD QPLPSGDLPS VNPTVQTVYG ALTDGEVIDA  240
LAGGVTVDEL IPSTTEDRQP EPQVLPASFD ALMHMIHPPL GVWEVPNGMR TETFEAYCRG  300
LVGSTYDVFN AQNAIVQTGH GALTDGEVVA AHTSDATVDE LIRSTTYGIQ PEPQILL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545