PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04072.1.g00030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TCP
Protein Properties Length: 402aa    MW: 43093.7 Da    PI: 10.4637
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04072.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP106.83.4e-33256330880
                           TCP   8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.sec.eaessss 80 
                                   ++++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++t+eWLl+qa+p+i ++tg+++s+a  +c +a s ss
  Zmw_sc04072.1.g00030.1.am.mk 256 SKDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTVEWLLRQAEPSILAATGSGTSPAvFSCsSAPSTSS 330
                                   79********************************************************99999444432222222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.5E-29255342IPR005333Transcription factor, TCP
PROSITE profilePS5136926.73256310IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
LRPSTATTAE AVGISSSHAQ RQTCCVSPGE RAASRQTFRW SSRALRASSV LRGSTHGYSC  60
ALLFHHSMPR YAINHRSALA PCSGFCSGSA ADAAYPFLDK SWGAGAVSRR VLREWFVVHE  120
YVRCRRQWSP ARGRRCGRGQ DDLEDGSADG GGAELEDGGV DEDETSSKTA VRTVVEPSSR  180
TGTCRSRALA RTARWRRDDV VAVAADASHT PRTKAMASRE HAAAIFHQVY RPTPAPAPAA  240
PAPMSLAALA XXXSGSKDRH SKVNGRGRRV RMPIVCAARV FQLTRELGLK SDGQTVEWLL  300
RQAEPSILAA TGSGTSPAVF SCSSAPSTSS SLRSLLLGKR PRQDVDEAPP PLWAAMQARP  360
VVVAWGLSTP AQEQAYASEA QGHRLNLLSV LSGTTKPAEE SR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP194133100