PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03967.1.g00080.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 328aa    MW: 36667.8 Da    PI: 8.8317
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03967.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.36.7e-15421742128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleev.ikev.diykvePwdLpkkvka..eekewyfFskrdkkya...tgk 72 
                                    +G+rF+Pt  e+v+++L + ++ +    +++ +  i+++ ++y+ eP dL  +++    +++ +fF++  ++++   ++ 
  Zmw_sc03967.1.g00080.1.am.mk  42 HQGYRFQPTPREVVSRHLPRLIACELrlmHDAIRPyIHDTnGVYDREPDDLAGMFQPtpATDDRFFFTTVVRQKHrpgSSV 122
                                   68*******************998885653333335999978*********853333225557899988776666233455 PP

                           NAM  73 rknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   r  r++  g W  + +   + ++++ ++g  + L +     ++g  tdW+m+ey+ 
  Zmw_sc03967.1.g00080.1.am.mk 123 RYVRVAGPGSWALQRSIDVLDEAGTVKIGELRRLRYK----KNGAYTDWLMKEYSC 174
                                   8888999****9888766555668899********97....78999********85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-1836196IPR003441NAC domain
PROSITE profilePS5100521.21741196IPR003441NAC domain
PfamPF023651.7E-943173IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MRAREEDEAA ARGDRRGKRR LRLASLARIE TPPPIKEESA LHQGYRFQPT PREVVSRHLP  60
RLIACELRLM HDAIRPYIHD TNGVYDREPD DLAGMFQPTP ATDDRFFFTT VVRQKHRPGS  120
SVRYVRVAGP GSWALQRSID VLDEAGTVKI GELRRLRYKK NGAYTDWLMK EYSCACSVKD  180
AVDGDNERVF CRIYVSPNAA NNNKKRPLPL SLKSPSPKRI QRAPVAPIGP IPPAGCTTKS  240
TLLSPHRPAA GPSAPTPPAD QAPHPDTPRP APVSRLPVPF VSPDPLQSTE DAVDDDFDEL  300
FDKLDTMLAY VEVSFPPCFD LCKFQLLT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012703694.12e-45uncharacterized protein LOC101768364
TrEMBLA0A368S8U71e-43A0A368S8U7_SETIT; Uncharacterized protein
TrEMBLK3ZME85e-44K3ZME8_SETIT; Uncharacterized protein
STRINGSi011838m4e-44(Setaria italica)
STRINGSi027763m8e-45(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799