PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03838.1.g00070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 161aa    MW: 17427.9 Da    PI: 11.1608
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03838.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.95.8e-1067108142
                                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                                   e+e++r+rrk +NR++A+rsR+RK+++++eL+  ++ L ae 
  Zmw_sc03838.1.g00070.1.sm.mk  67 EEERRRQRRKLSNRLSAQRSRARKQQRLDELRASAARLRAEK 108
                                   7899**********************************9996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.880.102.4E-66498IPR008917Transcription factor, Skn-1-like, DNA-binding domain
SMARTSM003380.002966129IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4569108IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.47E-571108No hitNo description
PROSITE patternPS0003607489IPR004827Basic-leucine zipper domain
CDDcd147027.27E-1176108No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MLSAQEALGL ENLVAPSCCG GARDQDMIAS GFTPWGPESC PSLDQVMMAA SSATPSPPAG  60
QGADEEEEER RRQRRKLSNR LSAQRSRARK QQRLDELRAS AARLRAEKXX XXAAALARRL  120
REARRLLALQ RLARFQPLPP HPMAEQAGGA APAVGLASLM T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16876ERRRQRRKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002466386.11e-33DNA-binding protein EMBP-1
TrEMBLC5WZ823e-32C5WZ82_SORBI; Uncharacterized protein
STRINGSb01g006850.14e-33(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP138452429