PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03686.1.g00070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 303aa    MW: 32660.9 Da    PI: 9.2671
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03686.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.72.1e-12138177541
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                                     k  rr+++NReAAr+sR+RKka+i++Le+   + ++Le+e
  Zmw_sc03686.1.g00070.1.sm.mkhc 138 KTLRRLAQNREAARKSRLRKKAYIQQLETgriRLAQLEQE 177
                                     7789***********************9644466777666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.2E-7134206IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.2E-10134183No hitNo description
PROSITE profilePS502178.657136179IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-8138179No hitNo description
PfamPF001703.3E-9138178IPR004827Basic-leucine zipper domain
PROSITE patternPS000360141156IPR004827Basic-leucine zipper domain
PfamPF141442.2E-23215289IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MAYPSTSGMI QASSSLHGGT MRRDPEGYDM PSDLDQALLL YFDGHQTKPS IQEQPQTLNI  60
FPSQPMHVEP SPKGSMTTAA AATQVAGSSK PAKPAGGQLG GGKPALKKDG DVVGGSKRGG  120
GAAASSSDQV GPRTPDPKTL RRLAQNREAA RKSRLRKKAY IQQLETGRIR LAQLEQEIQM  180
ARNQGAMWGT GALSPDAALF NLEYERWLGD HRRLVARLRA AEEEHWPDAE LRSYADETAS  240
HYGALMALKA RVAAADPLHL LSGLWKGAAE RCLLWIGGFR PSELVKSVMS DVPMHAGVTG  300
EEE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025810392.11e-147transcription factor TGAL8-like isoform X2
SwissprotQ69T211e-124TGAL8_ORYSJ; Transcription factor TGAL8
TrEMBLA0A2S3HHY11e-148A0A2S3HHY1_9POAL; Uncharacterized protein
TrEMBLA0A3L6PH661e-146A0A3L6PH66_PANMI; Transcription factor HBP-1b(C38)-like isoform X1
STRINGPavir.Db00756.1.p1e-147(Panicum virgatum)
STRINGPavir.J05543.1.p1e-149(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129722126
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]