PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03674.1.g00080.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family YABBY
Protein Properties Length: 131aa    MW: 14181.1 Da    PI: 4.1173
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03674.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY72.71.3e-22151316134
                         YABBY   6 sseqvCyvqCnfCntilavsvPsts....lfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenl 82 
                                    seq+ yvqC+fC+til+vsvPs s    l k+v+v+CG C+ +lsv+l +++  +++++ l        l+e +v+    
  Zmw_sc03674.1.g00080.1.sm.mk  15 LSEQLGYVQCSFCTTILLVSVPSYSdalqLTKTVAVQCGNCAGVLSVTLPQQTP-TPVVE-LRLP-----LQEPGVDPPPR 88 
                                   689*******************9875555789**************99976554.34443.2222.....34444444433 PP

                         YABBY  83 ksnvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfik 134
                                   +s +e++ + +      +l+  e e+v  v pv++PP +rqr Psayn+fik
  Zmw_sc03674.1.g00080.1.sm.mk  89 ESEDESSGEDR------ELEA-EAEDV--VFPVNKPPVRRQRTPSAYNCFIK 131
                                   33333322222......2232.33444..469*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046902.3E-2216131IPR006780YABBY protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007275Biological Processmulticellular organism development
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MSSSPECSPC LGILLSEQLG YVQCSFCTTI LLVSVPSYSD ALQLTKTVAV QCGNCAGVLS  60
VTLPQQTPTP VVELRLPLQE PGVDPPPRES EDESSGEDRE LEAEAEDVVF PVNKPPVRRQ  120
RTPSAYNCFI K
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004958092.16e-46PREDICTED: protein YABBY 7-like
SwissprotA2PZN85e-26YAB7_ORYSJ; Protein YABBY 7
TrEMBLK3ZZH09e-48K3ZZH0_SETIT; Uncharacterized protein
STRINGSi032004m2e-47(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136252831