PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03255.1.g00080.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 1091aa    MW: 116657 Da    PI: 6.5555
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03255.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.22.3e-14936978955
                           AP2   9 dkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++ +gr++AeIr+ +     r +r++lg+f+t++ Aa+a++aa+++l+g
  Zmw_sc03255.1.g00080.1.am.mk 936 RP-WGRYAAEIRHpV-----RkARVWLGTFDTPKAAARAYDAAARRLRG 978
                                   45.**********44.....55**************************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF082639.2E-72668IPR013210Leucine-rich repeat-containing N-terminal, plant-type
Gene3DG3DSA:3.80.10.103.8E-3528206IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520581.19E-4060301IPR032675Leucine-rich repeat domain, L domain-like
PfamPF138553.6E-772129IPR001611Leucine-rich repeat
SMARTSM0036921094118IPR003591Leucine-rich repeat, typical subtype
SMARTSM00369350140163IPR003591Leucine-rich repeat, typical subtype
PfamPF138555.7E-7142201IPR001611Leucine-rich repeat
SMARTSM00369250165188IPR003591Leucine-rich repeat, typical subtype
Gene3DG3DSA:3.80.10.104.1E-25214359IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520582.72E-54220492IPR032675Leucine-rich repeat domain, L domain-like
PfamPF135161.5306323IPR001611Leucine-rich repeat
SMARTSM0036941356379IPR003591Leucine-rich repeat, typical subtype
Gene3DG3DSA:3.80.10.101.3E-57360479IPR032675Leucine-rich repeat domain, L domain-like
SMARTSM00369370404427IPR003591Leucine-rich repeat, typical subtype
PfamPF005600.36406428IPR001611Leucine-rich repeat
SMARTSM0036923428452IPR003591Leucine-rich repeat, typical subtype
Gene3DG3DSA:3.80.10.101.3E-57552681IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520588.84E-18554672IPR032675Leucine-rich repeat domain, L domain-like
SMARTSM0036918573597IPR003591Leucine-rich repeat, typical subtype
SMARTSM00369160620644IPR003591Leucine-rich repeat, typical subtype
CDDcd000184.23E-11920988No hitNo description
SMARTSM003802.0E-21921992IPR001471AP2/ERF domain
PROSITE profilePS5103221.733921986IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.3E-24935987IPR001471AP2/ERF domain
SuperFamilySSF541714.84E-16935987IPR016177DNA-binding domain
PfamPF008478.6E-8936978IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005739Cellular Componentmitochondrion
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1091 aa     Download sequence    Send to blast
MSVLYKVLNL ICGALIIAAP AIQGHSDMQV LLQLKKFLQA QNPLNRGAYD GWSESDAVPC  60
RWAGVGCDSA GRVRSLDLSS SNISGPSFGN FSLLPRLAHL DLSANSINGP LQDDLRRCER  120
LRYLNLTKNF FSGVLDVSSL TKLHVLDVSQ NRFQERIDVN FPAICGNLTY LSVSGNNLSG  180
DVDGLFDGCP RLRYVDISWN SFSGSVLLGA TRFTHFIANN NNFTGTVSRS MFSTGCKLQT  240
LNIGSNYLFG EFPGSVANCT ALKFLSLWDN GFRGAIPSGI GSITGLEVLV LGSNRFDADI  300
PLELKNCSRL KYIDISDNGF GGEVQPVIGE LKSLKSIVLR ENNYTGGIDS SGILQLPNLT  360
MLDLGYNSFS GELPSNFSRT ASITVIMLPE NDFSGPIPPD YGLFVRLQIL DVSYNSLSGR  420
IPPEIGNLKS LLLLMLDGNQ LSGQIPKEIG NCTSLLWLNI AENLLSGEIP PEIASMGSNP  480
DPTFMENRRN QGEPLEPITN NCEGVSQWVP ASYPEFDFVN LLMKTPKNCR AEWIRLQSGY  540
HTVPMSSYDP AFGYVVLSGN LLSGEIPATI GAMSNLKLLL FDRNQLSRNL PPEIGQLPLD  600
GLNISYNSFS GNIPSEIGYM DSLGSLDLSW NNFSGPLPAS LNQLTRLTRF NVSYNPLLSG  660
NISTTGQLST FDENSFLGDP LLSPSSSISN LTPSESSSCG TEKREEIVVS GVAFLAFMLI  720
TFVVRELHYF IYLVKGGSGV GAGTPARQGL KVALGSNAGG QYGGGAKAEA TRGAGMDSRG  780
GVELDDSRLC SAEVSRQPGH VGDQQHRPLP ASQPNAGVPA APPAHGAAPA RHACAPRKNT  840
HPHLVNGQTT SPSPTHLAVC NTSARSAELP RKHVHQPIDP AQLPSYRSSS TAGTFVNRPM  900
APRRPTSPAG SGSGAAGEPP KLRGVXXXXX XXXXXRPWGR YAAEIRHPVR KARVWLGTFD  960
TPKAAARAYD AAARRLRGPR AATNYPDAAL PTPATSVSGS STTELLDESS CSALAAPPSL  1020
DLSLGLPTTP ACMYLDQEKA APALVHFLPL KGEEARSDGS GSSTSSSSVV DEPALSLGLD  1080
INLTWPIEAV A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4mna_A4e-634467937635LRR receptor-like serine/threonine-protein kinase FLS2
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015648807.10.0probable LRR receptor-like serine/threonine-protein kinase At1g74360
TrEMBLA0A0E0E3I20.0A0A0E0E3I2_9ORYZ; Uncharacterized protein
STRINGLPERR08G08960.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP212822