PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03242.1.g00050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 88aa    MW: 9595.53 Da    PI: 4.2208
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03242.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM271.3e-081286280
                           NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeek..ewyfFskrdkkyatgkrknratks 80
                                  ppG+ F+Ptdeel+         g++  +  v +++    +++Pw+L +++  +++     fF  rd++ ++ +r++r    
  Zmw_sc03242.1.g00050.1.sm.mk 12 PPGLVFDPTDEELI-------GLGEPEAFPGViVEDNTAANTQPWKLLQNHGLSDDdvPAAFFYVRDESRPNARRSRRCDGG 86
                                  8*************.......2344434434526667899*******74333333313558888889999999999997554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.92E-101087IPR003441NAC domain
PROSITE profilePS510059.821188IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MSPAKFLGDD HPPGLVFDPT DEELIGLGEP EAFPGVIVED NTAANTQPWK LLQNHGLSDD  60
DVPAAFFYVR DESRPNARRS RRCDGGGT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A3L6QIZ72e-16A0A3L6QIZ7_PANMI; Uncharacterized protein
STRINGPavir.Aa02111.1.p1e-15(Panicum virgatum)
STRINGPavir.Ia01183.1.p2e-15(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946