PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03178.1.g00040.1
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 279aa    MW: 29795.8 Da    PI: 7.1072
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
                           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g 46 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 94
                                  56******.**********965...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.9E-2945108IPR001471AP2/ERF domain
CDDcd000182.18E-2545101No hitNo description
PROSITE profilePS5103220.54745102IPR001471AP2/ERF domain
SuperFamilySSF541714.64E-2046102IPR016177DNA-binding domain
PRINTSPR003679.0E-84657IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-2846102IPR001471AP2/ERF domain
PfamPF008472.3E-114894IPR001471AP2/ERF domain
PRINTSPR003679.0E-86884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010102Biological Processlateral root morphogenesis
GO:0010432Biological Processbract development
GO:0010451Biological Processfloral meristem growth
GO:0010582Biological Processfloral meristem determinacy
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
3D Structure ? help Back to Top
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1936101571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtRequired to prevent the formation of axillary meristems within the spikelet meristem and permit the subsequent establishment of floral meristem identity (PubMed:12835399, PubMed:14503923). Mediates the transition from spikelet to floret meristem (PubMed:14503923). Determines the transition from panicle branching to spikelet formation. May specify floral organ identity by regulating the class B genes (Agamous-like genes) MADS6 and MADS17, as well as class E genes MADS1, MADS7 and MADS8 in floral meristem (PubMed:26744119). Possesses transactivation activity (PubMed:12835399). {ECO:0000269|PubMed:12835399, ECO:0000269|PubMed:14503923, ECO:0000269|PubMed:26744119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00520DAPTransfer from AT5G18560Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025804267.11e-105ethylene-responsive transcription factor FZP
SwissprotQ8H3Q12e-84FZP_ORYSJ; Ethylene-responsive transcription factor FZP
TrEMBLA0A1E5UMV01e-104A0A1E5UMV0_9POAL; Ethylene-responsive transcription factor ERF086
STRINGPavir.Ba00192.1.p1e-102(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
  2. Zhu QH,Hoque MS,Dennis ES,Upadhyaya NM
    Ds tagging of BRANCHED FLORETLESS 1 (BFL1) that mediates the transition from spikelet to floret meristem in rice (Oryza sativa L).
    BMC Plant Biol., 2003. 3: p. 6
  3. Liu HQ, et al.
    [Towards the positional cloning of a spikelet identity gene frizzle panicle (FZP) in rice (Oryza sativa L.)].
    Yi Chuan Xue Bao, 2003. 30(9): p. 811-6
  4. Jang S, et al.
    The OsFOR1 gene encodes a polygalacturonase-inhibiting protein (PGIP) that regulates floral organ number in rice.
    Plant Mol. Biol., 2003. 53(3): p. 357-69
  5. Rossini L, et al.
    Candidate genes for barley mutants involved in plant architecture: an in silico approach.
    Theor. Appl. Genet., 2006. 112(6): p. 1073-85
  6. Yi G, et al.
    Morphological and molecular characterization of a new frizzy panicle mutant, "fzp-9(t)", in rice (Oryza sativa L.).
    Hereditas, 2005. 142(2005): p. 92-7
  7. Duan Y, et al.
    Genetic analysis and mapping of gene fzp(t) controlling spikelet differentiation in rice.
    Sci. China, C, Life Sci., 2003. 46(3): p. 328-34
  8. Routledge AP, et al.
    Magnaporthe grisea interactions with the model grass Brachypodium distachyon closely resemble those with rice (Oryza sativa).
    Mol. Plant Pathol., 2004. 5(4): p. 253-65
  9. Lee DY,An G
    Two AP2 family genes, supernumerary bract (SNB) and Osindeterminate spikelet 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice.
    Plant J., 2012. 69(3): p. 445-61
  10. Derbyshire P,Byrne ME
    MORE SPIKELETS1 is required for spikelet fate in the inflorescence of Brachypodium.
    Plant Physiol., 2013. 161(3): p. 1291-302
  11. Poursarebani N, et al.
    The Genetic Basis of Composite Spike Form in Barley and 'Miracle-Wheat'.
    Genetics, 2015. 201(1): p. 155-65
  12. Bai X, et al.
    Regulatory role of FZP in the determination of panicle branching and spikelet formation in rice.
    Sci Rep, 2016. 6: p. 19022
  13. Ma X, et al.
    Genomic structure analysis of a set of Oryza nivara introgression lines and identification of yield-associated QTLs using whole-genome resequencing.
    Sci Rep, 2016. 6: p. 27425